Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1225 ATGGCGAAAACGCGGCCAGGGAGAAAGGACGTGGACTCGTACACCATAAGAGGCACCAACAAGATCGTCCGAGCTGGAGACTGCGTTCTGATGCGGCCCTCGGACACGTCGAAGCCCCCGTATGTGGCGCGCGTGGAGAAGATCGAGCAGGACAACCGGAGCAACATGAAGGTGCGCGCGAGGTGGTATTACCGGCCCGAGGAGTCAATTGGGGGCCGGAGGCAGTTCCATGGGGCGAAGGAACTGTTCCTCTCCGACCACTATGATCTGCAGAGTGCGCACACCATCGAAGGCAAGTGCGTGGTGCACACTTTCAAGAACTACACCAAGCTTGAGAATGTGGGTGCTGAGGATTACTATTGTAGATTTGAGTATTGCAAGTGTGAGATGCCGTATAACCCAGATGACCTCATGGAATTATGTGATTCCAGCACCTGCAGAATGAGCGCCCTAAAGGGTCTTAAAGAGTTGTACCATCCTGCTTGCGTGGGCATGACTATTGAAGAAGCGAAGAAACTAGATCATTTTGTATGTGCTGAATGTTCATCCGATGATGATATGAAGAAACCCCAAGCTACATTTTCTACATCACCGGGTGCCGATGGCAAGGTTGAGCCGAAGCGGCGAAAGAGAGGACCATAG 642 0.5249 MAKTRPGRKDVDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRSNMKVRARWYYRPEESIGGRRQFHGAKELFLSDHYDLQSAHTIEGKCVVHTFKNYTKLENVGAEDYYCRFEYCKCEMPYNPDDLMELCDSSTCRMSALKGLKELYHPACVGMTIEEAKKLDHFVCAECSSDDDMKKPQATFSTSPGADGKVEPKRRKRGP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1225 213 Gene3D - 2 116 IPR043151 -
Aed5g1225 213 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Aed5g1225 213 SUPERFAMILY FYVE/PHD zinc finger 124 185 IPR011011 -
Aed5g1225 213 CDD BAH_BAHCC1 22 141 - -
Aed5g1225 213 PANTHER BNAC03G64850D PROTEIN 3 208 IPR045205 GO:0006325|GO:0035064
Aed5g1225 213 SMART BAH_4 21 136 IPR001025 GO:0003682
Aed5g1225 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 197 IPR013083 -
Aed5g1225 213 Pfam BAH domain 23 125 IPR001025 GO:0003682
Aed5g1225 213 PANTHER OS08G0421900 PROTEIN 3 208 - -
Aed5g1225 213 MobiDBLite consensus disorder prediction 183 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1225 Aed-Chr5 11039216 11044274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1225 31 125 Core DNA Replication Machinery Family AT4G14700 29.167 4.74e-09 53.9