Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1181 ATGGAGATATTATTTTCTTCTTCTTCTTCAGCAGCAGCGATATGTGTGGTGACGGTGTTGGTAGCTTTGATTCCGCTATGGGCACTGAAGATGCTCGACACGCTGTGGCTTCGCCCTAAGAGGTTCGAGAACCTTCTCAGAGCGCAAGGTCTTCACGGTGATTCATACTCCAACCAAGCCAATGTTCAACAACAACACAATTCCAAAGCTTTTGGTCTCTCCGATGATGTTGCGCCTCATTTAACCTCTTTGTTAGATCAAACTATCACCAAATATGGCAAGAAATCCTTCTTTTGGGAAGGCAGAACACCAAAGAACATGCTACCAGCATTTTCTCAAAGCTGCCATGAAATGATTAGAACTTGGAAGGGAATGTTGTCATCAGATGGAAAATGTGAGATTGACATTTGGCCTTACATTAAGAATTTGACTTGCGATGTAATTTCTAGAACAGCATTTGGAAGCAGTTATGCAGAAGGAGAAAAAATATTCCAACTTCTGCGAACGCAAGGGTATCTTCTCATGACAGCAAAAAACAATGACATACCAATATTGCGGCATCTACCAACAAGTACCACCAAGAAGATGAGAGCAATTGAAAGACAGATCCATGATTCAATTGAGGTTATCATAAAAAACCGGCTGAAAGCCATGGAGAATGGTGAAAATGACAATGAAGATTTATTAAGCATGCTTTTGGAATCAAATCACATGGAAATCCAGGGACATGGAAACAATAGGAGTGTTGGAATGACCAACAAAGATGTAATTGAGGAATGCAAGCTATTCTACTTGGCAGGGCAAGAGACCACTTCATCTCTTCTGGTTTGGACAATGGTCTTATTGGCTAGGTATCCTCAATGGCAAGTACAAGCAAGAGAAGAAGTTCTTCATGTTTTTGGAAACCAAACTCCAAACTTCAATGGGTTAAGCCACCTTAAAATTGTGACGATGATTTTACATGAGGTTCTCAGGTTATACCCTCCTGCAATTCACTTCGCTCGCGAACTTCAAAAGGATATGAAACTTGGAAATCTATCACTACCTGCAGGAATACGCATTACCATGCCAATATTATATATTCACCATGATACTGATATATGGGGTGATGATGCAAAGGAGTTCAAACCTGAAAGGTTCTCTGAAGGAATTGCTAAGGCAACAAAGGGTCAACTTTCATTTTACCCATTTGGATCGGGCCCTAGAATATGCATTGGCCAAAACTTTGCCTTATTGGAAGCCAAGATTGTGTTGTCATTGCTTCTGCCACAGTTCTCATTTGAGCTTTCTCCGGCATATCAACATGCTCCCACAGATATGCTTACTTTGCAGCCAAAACACGGGGCACACATTGTTTTGCAGAAACTGTGA 1371 0.4114 MEILFSSSSSAAAICVVTVLVALIPLWALKMLDTLWLRPKRFENLLRAQGLHGDSYSNQANVQQQHNSKAFGLSDDVAPHLTSLLDQTITKYGKKSFFWEGRTPKNMLPAFSQSCHEMIRTWKGMLSSDGKCEIDIWPYIKNLTCDVISRTAFGSSYAEGEKIFQLLRTQGYLLMTAKNNDIPILRHLPTSTTKKMRAIERQIHDSIEVIIKNRLKAMENGENDNEDLLSMLLESNHMEIQGHGNNRSVGMTNKDVIEECKLFYLAGQETTSSLLVWTMVLLARYPQWQVQAREEVLHVFGNQTPNFNGLSHLKIVTMILHEVLRLYPPAIHFARELQKDMKLGNLSLPAGIRITMPILYIHHDTDIWGDDAKEFKPERFSEGIAKATKGQLSFYPFGSGPRICIGQNFALLEAKIVLSLLLPQFSFELSPAYQHAPTDMLTLQPKHGAHIVLQKL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1181 456 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 105 452 - -
Aed5g1181 456 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 105 - -
Aed5g1181 456 PANTHER 11-OXO-BETA-AMYRIN 30-OXIDASE-RELATED 16 105 - -
Aed5g1181 456 SUPERFAMILY Cytochrome P450 102 454 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PRINTS E-class P450 group I signature 255 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PRINTS E-class P450 group I signature 143 161 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PRINTS E-class P450 group I signature 358 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PRINTS E-class P450 group I signature 275 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PANTHER CYTOCHROME P450 FAMILY MEMBER 105 452 - -
Aed5g1181 456 Gene3D Cytochrome P450 79 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Aed5g1181 456 PRINTS P450 superfamily signature 318 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PRINTS P450 superfamily signature 266 283 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g1181 456 Pfam Cytochrome P450 105 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1181 Aed-Chr5 10324760 10327955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1181 105 456 Cytochrome P450 AT3G14680 53.955 1.56e-138 405