Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1155 ATGATGCTCTTTGGTGAGAAGCTTGTTGGTAAAGATGAGAAAGCCATAAAAGAGACTCATCAAGACATGGGAAAGTTTGATGCTCTTAAGGAAAAATATGGATCCAGTAATGGCCATAATTCTACTTTTGGCCGTTCATTTGCTAACTACAATGCTGGCTATTATCATTCATTTTCTGGAGATTACATGGAGGCAGTAAATCCATATGCTTTGAACCTACCAATGCATTTTGATGATGCGAACATTCCTCCGGAAGTTGAGGAACTCGTTCCTCTGCCGAGAATCGATTTCAGAGATTATATTCCGACTTACTTATCTCAGCCTCTAGAGCCTACTCTTCAGCTTCAGCACCATTCTGGAGTACCGATAACTTCTCCGGCAGTACGACAATACTCTCAAACTCCCCTGAATATGAAGAAACCAGATAATGGACCACAGGACAGGAGGCGGAAGTTGGGAAACCAAGCAGCGGGGTCATCTAAGTTTTCTGAGAGTAACAAGAAGCCTAACATTTTTTACGCTTCTCACCATGGCTCTGCAAACAATTATGGGGTCCACCTACTGCCACTCGGGGCACCACAATGGGGAGGTGTTAGAGCACCAATGATGACATCTTATAATCCATATCCTTCAAACTTTGTTGGATCCTCATATCATCATCATCCAGGAGCTGGACCTGTTAATCAGGCGTGGTCGGCGAATACTTATCATGCGCAGACATTGCCTTATTATAATTATGCAGCTCCATATACTTATACACCTTCCTTTGTTCATGCTGATCCTGGGAAATTGTTTTATACCCCTTGGGCTGACAGTTCTGTGGGAGATGCAAATACTGGAGCAACTGCTGATAGTATTGTTGCTACAATATCTGATGAAGCCAGAGAAGAAATTCTCAAGAAATTTCGAAGCTTTAAACAATTTGACGTTGTTGAAGACGTTTCAGACCATGCGTTTGTCAATGTCAACTCTTCCATGCAACATCAACCAAGGCATTGGGCCAAAAGAATCCAGGAAGAGTGGAAGTCATTGGAGAAGGATTTACCAGCTACAATATTTGTGAGAGTTTATGAGTCAAGAATAGATCTTATGAGGGCTGTGATTATTGGAGCAGAGGGAACACCTTATCATGATGGCCTTTTCTTCTTTGATGTTTTCTTTCCGAGTAACTATCCCTATGCAGCCCCGAATTTCGAGGACTTTGTGGCTGGATACTTCTGCAGCCGAGCTGATGACATTATGATGGCATGCAAAGCCATGGAGGGTGCTCAAGTTGGCTGTGTGGTCAAAGGTGGAGTGCAGGACGTTGACCAAGGTGACAAGAGCTGCTCAGGCCACTTCAGGGGATCTGTATCTGAACTTATGCAGATGCTTTCTAAGGAGTTTACTCGGATTGGAGCAAAGGACTATGATAGATTGTTTCGAATAACCACGGCGGCGGTAGATTCGTCCGGTGGAATGCTGATGGCAGCAGCGGGGAATCCGTTCGGTGGAATGCCTGGTGGTGGTGGTGCTGGATCGATTCCTTGA 1530 0.4444 MMLFGEKLVGKDEKAIKETHQDMGKFDALKEKYGSSNGHNSTFGRSFANYNAGYYHSFSGDYMEAVNPYALNLPMHFDDANIPPEVEELVPLPRIDFRDYIPTYLSQPLEPTLQLQHHSGVPITSPAVRQYSQTPLNMKKPDNGPQDRRRKLGNQAAGSSKFSESNKKPNIFYASHHGSANNYGVHLLPLGAPQWGGVRAPMMTSYNPYPSNFVGSSYHHHPGAGPVNQAWSANTYHAQTLPYYNYAAPYTYTPSFVHADPGKLFYTPWADSSVGDANTGATADSIVATISDEAREEILKKFRSFKQFDVVEDVSDHAFVNVNSSMQHQPRHWAKRIQEEWKSLEKDLPATIFVRVYESRIDLMRAVIIGAEGTPYHDGLFFFDVFFPSNYPYAAPNFEDFVAGYFCSRADDIMMACKAMEGAQVGCVVKGGVQDVDQGDKSCSGHFRGSVSELMQMLSKEFTRIGAKDYDRLFRITTAAVDSSGGMLMAAAGNPFGGMPGGGGAGSIP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1155 509 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 397 474 - -
Aed5g1155 509 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 72 397 - -
Aed5g1155 509 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 397 474 - -
Aed5g1155 509 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 72 397 - -
Aed5g1155 509 SUPERFAMILY UBC-like 322 397 IPR016135 -
Aed5g1155 509 Gene3D Ubiquitin Conjugating Enzyme 291 398 IPR016135 -
Aed5g1155 509 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 332 398 IPR000608 -
Aed5g1155 509 MobiDBLite consensus disorder prediction 130 164 - -
Aed5g1155 509 Pfam Ubiquitin-conjugating enzyme 336 398 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1155 Aed-Chr5 9931549 9934016 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1155 288 396 Miscellaneous Gene Families AT2G33770 46.847 2.93e-28 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0611 1 7469459 7474786 Aed5g1155 5 9931549 9934016 PCT