Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g1076 ATGATATGTTGCAGTGGCTACATGGCACCAGAATATGCAGCTGATGGTCTTTTTTCTGTGAAATCTGATGTTTTCAGTTTTGGTATTTTGTTGCTGGAGATTATAAGTGGAAAGAGAAATAGAGGTTTTTATCTTGAAAACCAATCTCCTAACCTTGTCACTCATGCATGGAATCTGTGGAAACATGGCAGGGCTTTGGAAATGGTTGATTCAAACATAGAGGACTCTTGTGTTGTATCAGAAGTATTGCGTTGTATCCATGTCAGTCTCTTATGTGTTCAGCAACATGCAGAGGATAGGCCTGTTATGCCTTCTGTGGTTTCAGTGTTGGGAAGTGAGAGTGAATTGGCTGAGCCAAAAGAACCTGGCTTCTATGTAAAGAATGATTTAGGTGCAACAATTTCCATCTGA 411 0.4015 MICCSGYMAPEYAADGLFSVKSDVFSFGILLLEIISGKRNRGFYLENQSPNLVTHAWNLWKHGRALEMVDSNIEDSCVVSEVLRCIHVSLLCVQQHAEDRPVMPSVVSVLGSESELAEPKEPGFYVKNDLGATISI 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g1076 136 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 4 131 - -
Aed5g1076 136 Pfam Protein tyrosine and serine/threonine kinase 6 109 IPR001245 GO:0004672|GO:0006468
Aed5g1076 136 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 4 131 - -
Aed5g1076 136 SUPERFAMILY Protein kinase-like (PK-like) 4 108 IPR011009 -
Aed5g1076 136 Gene3D Transferase(Phosphotransferase) domain 1 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g1076 Aed-Chr5 8821249 8821931 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g1076 6 131 Receptor kinase-like Gene Family AT4G23150 51.969 1.25e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed5g1076 PK_Tyr_Ser-Thr 1.4e-09 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g1076 5 8821249 8821931 Aed5g1076 5 8821249 8821931 ECH