Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1836 ATGAACACCGCTAACTCTAACAAGCCTGATTGTTCTCCTTCACCTACCATTCATCAACGTAGGCTCACCCGTCAGCGGAAGCTTCGTTACCTGACCGACAAAGACGCTGGTTTGCATTCAACCACCTCTCTACCCGCCTCTCCTCTTCCCTCCTTTAAGTCCGGTTCCACTTCCGACCACTGGTCTTCCTCTGCGGTTCCTCAACCGCTTCCGCGTCCCGACTCCCCGTTGACCCGCCGTCACCACCACCTCGGATCTCCCCCTTTAGCTTTTCAAAGAAGGTCGGTCGATCATGATGCGGCGAGAAGTTTAAGGTCTGCCAGCAATTTGGGTAGACCTTCTTTTGATCCGGTCACTCCTAATGCCAAATATGATTTGAGAGTCAATATTCCGCCTGCAAGACTCTTGGCAGGCAATACTAGTTCGTGTAAAGATGACAGAGAACTCTCTCATGAGAATGACTCTGAAAATGTTTCCAGCTTGAGATTGCATTTTTCGGCCAAGAGTGCTCCCAACAGCATATTGTCCAGTCCTGTTACTAGTCCACGAAGATCCAGCAATGTAGATTTCTATGATCCTTCCATAATTTTTCCTCAAGATTTTATTGACATTTTGAAAGTGTCACCAGCTAAAACTGCTCAGAGTCCAGAAAAGTCTCCTCTGCGCAGCCCTGGGAGCCACCTCAATCAAGAGGGGTCTCAGCTTCATAAATTTAACACCAGAGTGTGGCCTGAAAATAATCATGTGGATGCACATCCACATCCGCTGCCCCTTCCTCCTAGAACTTCACCACAGACAGCACACTTACCTCCGCAGCATCAACCAAGTATCGTGCACCTCACCACAGAAAATTCGCCTTCAATGAAAGGTCAATGGCAGAAAGGAAAACTTATAGGGCGTGGATCATATGGATCTACTGGAGCCTCATGTGCAATGAAAGAGGTGGATCTGTTCCCCGATGATCCTAAATCTGCTGACTGCATAAAGCAACTTGAGCAGGAAATCAGAATTCTCCGTCAATTACACCATCCCAACATTGTGCAGTATTATGGCAGTGAAATACTTACCGATCGATTGTACATATATATGGAGTATGTTCATCCTGGATCACTTCATAAGTTTATGCATGAACATTGTGGTGCTATGACAGAATCTGTGGTTCGCAATTTCACACGACATATTCTCTCTGGATTGGCATACTTACATAGTACCAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGTTGGTCGATGCATCAGGCATCGTTAAGCTTGCAGATTTTGGGGTGTCAAAAATTCTGACAGAGAAATCATATGAACTTTCATTGAAGGGCAGTCCCTACTGGATGGCTCCTGAGCTCATGAAGGCAGCCATAAAAAAAGAATCCAGTCCTGACATTGCCATGGCCATTGATATATGGAGCTTAGGGTGCACTATCATCGAAATGCTGACAGGAAAACCTCCTTGGAGCGAATTTGATGGGCCTCAAGCCATGTTCAAGGTACTGCACAAATCCCCAGATATACCTGAAAGTTTGTCTTCAGAGGGACAGGATTTCCTTCACCAGTGTTTCAGAAGGAATCCAGCAGAACGACCATCAGCAGCAGTGCTTCTTACACATTCCTTTGTACAAAATTTGCATGATCAAGATGTCCTAGTTCATTCACAGGGACAAAGCTGTCCCAGAGGAGACCCCGGACCAGGAGATGATTCACGCAGACATAGTCCCGGTCACAGTTCAAGAAGTAGCCGTGGTGTAGCATCCTTGCGCTCACGTGAAACTTCGACGAAAAAGTATGATTCGGAAGATTCTAATTCTAACTCTAATAATGTGACATCTTCTCGTGATTCTCCTTGCTCGATGACAGAAATAAACAGTCCTCAGTCTCCCTTGAAATCTAATGCACTTAATTACATGGCTGTTACCAATACCAGCAGCATACTACCCATCGGTGCCGTTATGAAACTCATCAGGCACATTCCAGAAGTTCAGCACTAA 2004 0.4571 MNTANSNKPDCSPSPTIHQRRLTRQRKLRYLTDKDAGLHSTTSLPASPLPSFKSGSTSDHWSSSAVPQPLPRPDSPLTRRHHHLGSPPLAFQRRSVDHDAARSLRSASNLGRPSFDPVTPNAKYDLRVNIPPARLLAGNTSSCKDDRELSHENDSENVSSLRLHFSAKSAPNSILSSPVTSPRRSSNVDFYDPSIIFPQDFIDILKVSPAKTAQSPEKSPLRSPGSHLNQEGSQLHKFNTRVWPENNHVDAHPHPLPLPPRTSPQTAHLPPQHQPSIVHLTTENSPSMKGQWQKGKLIGRGSYGSTGASCAMKEVDLFPDDPKSADCIKQLEQEIRILRQLHHPNIVQYYGSEILTDRLYIYMEYVHPGSLHKFMHEHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGVSKILTEKSYELSLKGSPYWMAPELMKAAIKKESSPDIAMAIDIWSLGCTIIEMLTGKPPWSEFDGPQAMFKVLHKSPDIPESLSSEGQDFLHQCFRRNPAERPSAAVLLTHSFVQNLHDQDVLVHSQGQSCPRGDPGPGDDSRRHSPGHSSRSSRGVASLRSRETSTKKYDSEDSNSNSNNVTSSRDSPCSMTEINSPQSPLKSNALNYMAVTNTSSILPIGAVMKLIRHIPEVQH 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1836 667 SMART serkin_6 292 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1836 667 Pfam Protein kinase domain 293 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1836 667 MobiDBLite consensus disorder prediction 36 65 - -
Aed4g1836 667 ProSiteProfiles Protein kinase domain profile. 292 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1836 667 SUPERFAMILY Protein kinase-like (PK-like) 290 616 IPR011009 -
Aed4g1836 667 MobiDBLite consensus disorder prediction 212 231 - -
Aed4g1836 667 MobiDBLite consensus disorder prediction 1 123 - -
Aed4g1836 667 MobiDBLite consensus disorder prediction 211 231 - -
Aed4g1836 667 MobiDBLite consensus disorder prediction 557 633 - -
Aed4g1836 667 MobiDBLite consensus disorder prediction 246 272 - -
Aed4g1836 667 MobiDBLite consensus disorder prediction 603 633 - -
Aed4g1836 667 Gene3D Transferase(Phosphotransferase) domain 1 289 564 - -
Aed4g1836 667 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 14 648 - -
Aed4g1836 667 MobiDBLite consensus disorder prediction 1 19 - -
Aed4g1836 667 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 14 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1836 Aed-Chr4 22550437 22555713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1836 17 547 MAP Kinase Kinase Kinase AT5G66850 45.918 1.26e-147 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed4g1836 Pkinase 3.2e-59 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0176 11 1405972 1410609 Aed4g1836 4 22550437 22555713 PCT