Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1582 ATGTTAAACGATGATTCCTTCTCCGCTTTCAGCGACTGCAACAGCGACAGATCCGGCGAATTTCCCACGGAGTCTTCGGAGAGCCGCCGCCGCCTCCTGATCGCGTGCGCCTCCGAGAATTCCGACGAATTGATTCGGCAACTGGTTCTGAAACTGGAGTCCTGTTCCATTGAGGAACAAAAACAAGCCACCATGGAAATCAGGTTACTCGCCAAGAACAAGCAAGAGAACCGCCTCAAAATCGCTAAAGCCGGCGCCATTAAACCCTTGATTTCACTCTTATCATCAGCATCGGACCTTCAGCTTCAGGAATACGTGGTGACCGCGATTCTGAATCTCTCCCTCTGCGACGAGAACAAGGAGGCCATCGCTTCTTCGGGTGCGGTGAAGCCGCTTGTGGCGGCGCTGGAGACAGGCACGGCGACGGCGAAGGAGAACGCTGCGTGTGCGCTGCTTCGTATATCGCACAATAAGGAGGAGCAGAAGGTGACGATAGGGAGGGCGGGGGCGATTCCGCATCTGGTGAAGCTTCTAGAAGGAGGGGGATTGCGCGGGAAGAAGGACGCGGCGACTGCGCTCTACGCGCTGTGTTCGGCGAAGGAGAATAAAGTGAGGGCGGTGAGGGCTGGGGTGATGAGACCACTGGTGGAGCTGATGGCGGAGTTGGGATCGAGCATGGTGGACAAAGCAGTGTACGTGGTGAGCGTGGTGGTGTCGGTGGCGGAGGGGAGGGCGGCGCTGGTGGAGGAGGGAGGGATACCGGTGCTGGTGGAGATAGTGGAGGTGGGAACGCAAAGGCAGAAGGAGATAGCGGTAGGGGTATTGTTGCAGATTTGCGAGGAGAGTGTGGTGTACCGTACTATGGTGTCCCGCGAAGGAGCCATTCCTCCCTTGGTTGCTTTCTCGCAATCACCAACCAATCGCGCCAACCAAAAGGCTGAGAAACTGATAGAGCTTCTACGACAACCAAGATCCGGCAATGGCGGTGCTCGTGTGCCCCCACAATCCAACACTCAAACTCAAACCCCAAAACAGACATACAGAGGGCACAACTTGTAA 1059 0.5628 MLNDDSFSAFSDCNSDRSGEFPTESSESRRRLLIACASENSDELIRQLVLKLESCSIEEQKQATMEIRLLAKNKQENRLKIAKAGAIKPLISLLSSASDLQLQEYVVTAILNLSLCDENKEAIASSGAVKPLVAALETGTATAKENAACALLRISHNKEEQKVTIGRAGAIPHLVKLLEGGGLRGKKDAATALYALCSAKENKVRAVRAGVMRPLVELMAELGSSMVDKAVYVVSVVVSVAEGRAALVEEGGIPVLVEIVEVGTQRQKEIAVGVLLQICEESVVYRTMVSREGAIPPLVAFSQSPTNRANQKAEKLIELLRQPRSGNGGARVPPQSNTQTQTPKQTYRGHNL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1582 352 MobiDBLite consensus disorder prediction 1 24 - -
Aed4g1582 352 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 5 331 - -
Aed4g1582 352 SMART arm_5 240 280 IPR000225 GO:0005515
Aed4g1582 352 SMART arm_5 158 198 IPR000225 GO:0005515
Aed4g1582 352 SMART arm_5 74 115 IPR000225 GO:0005515
Aed4g1582 352 SMART arm_5 116 156 IPR000225 GO:0005515
Aed4g1582 352 SMART arm_5 199 239 IPR000225 GO:0005515
Aed4g1582 352 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 85 128 IPR000225 GO:0005515
Aed4g1582 352 PANTHER U BOX DOMAIN-CONTAINING 5 331 - -
Aed4g1582 352 MobiDBLite consensus disorder prediction 1 21 - -
Aed4g1582 352 SUPERFAMILY ARM repeat 40 312 IPR016024 -
Aed4g1582 352 MobiDBLite consensus disorder prediction 324 352 - -
Aed4g1582 352 Gene3D - 185 325 IPR011989 -
Aed4g1582 352 Gene3D - 21 184 IPR011989 -
Aed4g1582 352 MobiDBLite consensus disorder prediction 329 352 - -
Aed4g1582 352 Pfam Armadillo/beta-catenin-like repeat 117 155 IPR000225 GO:0005515
Aed4g1582 352 Pfam Armadillo/beta-catenin-like repeat 75 114 IPR000225 GO:0005515
Aed4g1582 352 Pfam Armadillo/beta-catenin-like repeat 159 197 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1582 Aed-Chr4 20616022 20618077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1582 7 329 U-box Gene Family AT2G23140 46.687 6.85e-81 257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0382 6 3311644 3315357 Aed4g1582 4 20616022 20618077 PCT