Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1579 ATGGACCCCAGAATCTGGAGCAAACTACCTCCTGATGTCGTGGAACACATACTCTTGTTACTTCCTCTGAAAACACTCTTGAATCTGAGACCCACTTGCAAGGCCTTCACCTCTCTTCTCTTTTCTCCTTCCTTTGTTTCCAAACACTCTTCTTCTTCTTCATCTTCTTCACCATTCTCTTCGTTTCTCTTACTCTCATACCCTCAGTGCCCCTACTACTTCTTTCTCTACGACTCGAACCTCTGCTCTTGGCGGACCATCGCTCTCTCAAACTCTCTCCCATTCTCTTCTTCCTTCACACTTGTTTCCTCCTCCGGTGGCCTCTTCTGCCTCTACAACCCAACCTCTTCTTCATTTCTCGTGTACAACCTCTTTGTCAAGTCCTCAAGAAGCATCGAATCCCCAACTCGGTCTCTTCTTCACTTGGGACACCTCACTTTTGTTGTCACCACCCCTCTTGGCTACTACATAGTGCTTCGTTCTAACTCCAACACTAGTAGTGTCTTCGTTTACGACTCCAGCGAACTCTCTTGGCGGCGCTTCGAGGGTTTCAATGGTGTTCTCAGCGACCAGGAGGGTGCTTTCTTCGATGGGGGATTGTATTTCACCACCCCAGAACCGTTTTCGGTGGTGCGTTTCGATTTGGAGAGTGGGAAGTGGGAGAGGCACGTGGCTGAGTTGCCTCAAGAACTCACTTTTGTGAGATTGGTGAGTGAGAATGATGATAACAAGAAGTTGTATTTGCTTGGTGGGGTTGGGAACGATGGAATCTCGAGGAGCATCAAGTTGTGGGAATTGAAGAGTGATGAAGGGGTTTCCCTTTGGGTGGAAGTGGTGGAGTTGGCTGAGATGATGTGTAGGAAATTAGTGTCGGTTTGTTACCATAACTATGAGCATGTATATTGCTTCTGGCATGAGGGAATGATATGCGTATGCTGCTATATGTGGCCAGAGATACTGTATTACAATGTCTTCAGGGGTACTTGGGATTGGCTTCCAAGGTGCCCCTATTTGCCTCTCAAATGTAGCTGTGGTTTCAAGTGGTTCTCTTTTCTTCCAAAGCTCTATGCTTCGGTATGA 1080 0.4722 MDPRIWSKLPPDVVEHILLLLPLKTLLNLRPTCKAFTSLLFSPSFVSKHSSSSSSSSPFSSFLLLSYPQCPYYFFLYDSNLCSWRTIALSNSLPFSSSFTLVSSSGGLFCLYNPTSSSFLVYNLFVKSSRSIESPTRSLLHLGHLTFVVTTPLGYYIVLRSNSNTSSVFVYDSSELSWRRFEGFNGVLSDQEGAFFDGGLYFTTPEPFSVVRFDLESGKWERHVAELPQELTFVRLVSENDDNKKLYLLGGVGNDGISRSIKLWELKSDEGVSLWVEVVELAEMMCRKLVSVCYHNYEHVYCFWHEGMICVCCYMWPEILYYNVFRGTWDWLPRCPYLPLKCSCGFKWFSFLPKLYASV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1579 359 Gene3D - 107 357 IPR015915 GO:0005515
Aed4g1579 359 SUPERFAMILY F-box domain 3 78 IPR036047 GO:0005515
Aed4g1579 359 Gene3D - 4 48 - -
Aed4g1579 359 Pfam F-box domain 6 45 IPR001810 GO:0005515
Aed4g1579 359 ProSiteProfiles F-box domain profile. 3 49 IPR001810 GO:0005515
Aed4g1579 359 PANTHER F-BOX/KELCH-REPEAT PLANT PROTEIN 5 357 - -
Aed4g1579 359 SUPERFAMILY Galactose oxidase, central domain 57 337 IPR011043 -
Aed4g1579 359 PANTHER F-BOX/KELCH-REPEAT PROTEIN 5 357 - -
Aed4g1579 359 SMART fbox_2 9 49 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1579 Aed-Chr4 20602107 20603186 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0380 6 3298444 3299616 Aed4g1579 4 20602107 20603186 PCT