Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1572 ATGGACAAGTTGAATATGTTGATTTCTTTGCTGCTAGTTTTCTCTAGCAGACACATCATAGCAGAAAAGAAAACAACACCCCATGGCACAAAAAGCACATACATAATCCACATGGACAAGTTGAACATGCCAGAGAGTTTCAACGATGACCATCTCCTCTGGTATGATTCATCACTAAAATCAGTGTCAGACTCAGCGGAGATGCTCTACACATATAAAAAAGTAGCTCATGGCTACTCCACAAGGCTAACCACCCAAGAAGCAGAGTCGCTCTCAAAGCACCAAGGAGTTCTCTCTGTGATCCCAGAAGTTAGATACGAGCTTCACACAACTCGAACACCAGAGTTTCTGGGGTTAGCCAAATACACGACTCTTTCACTGCCCTCTGGAAAACAAAGCGACGTCGTTGTTGGAGTGCTGGACACCGGTGTGTGGCCCGAACTAAAGAGCTTCGTCGACACCGGACTCGGGCCAGTACCCAGTAGCTGGAAAGGTGAGTGTGAAAAAGGTAAGAACTTCAACCCATCAAACTGTAACAAGAAACTTATTGGTGCAAGGTTTTTCTCCAAGGGCTACGAAGCCGCCTTTGGACCCATCGATGAAAAGACAGAATCAAAGTCACCGAGGGACGATGATGGCCACGGAAGCCACACATCAACAACAGCAGCAGGCTCTGCAGTTGCAGGAGCAAGCCTATTCGGTTTTGCAAATGGGACAGCAAGAGGCATGGCCACTCAAGCAAGAGTTGCTACTTACAAAGTGTGTTGGAATGGAGGGTGCTTTACATCAGACATAGCTGCTGGCATTGAGAAGGCCATTGAAGATGGTGTCAACATTCTTTCCATGTCAATTGGGGGAGGCTTGACGGATTACTACAAAGACACCATTGCAATTGGAACATTTGCAGCCACTGCCCATGGAATACTGGTTTCCAATTCAGCGGGAAATGGCGGGCCTAGTCAAGCAACTCTGTCTAATGTGGCACCATGGCTAACCACAGTGGGTGCTGGAACTATAGACCGTGAGTTCCCTGCCTATCTCACCCTCGGAAATGGGAAGATATACACCGGGGTGTCCCTTTACAACGGCAAACGTCCACCTAATTCTCTGCTTCCGATTGTTTATGCCGGCAACGTCAGCGACGAATCTCAAAACCGGTGCACCAGGGGAAGTCTGATTGCTGAGAAAGTAGCGGGAAAAATCGTGATATGTGACCGAGGAGGGAACCCCAGGGTGGAGAAGGGTTTGGTGGTGAAGAGTGCTGGAGGCATTGGGATGATATTGACAAACAATGAAGACTACGGGGAAGAGCTTGTTGCTGATTCCTATCTCCTCCCTGCAGCAGCTTTGGGCTTGAAATCCAGCAATGAGATAAAGAAGTATGTTTTCTCATCTCCAAATCCAACAGCCAAACTTGGATTTGGTGGGACTCAGTTAGGTGTTCAACCATCCCCAGTGGTTGCAGCTTTCAGCTCAAGAGGGCCAAATGTGCTCACACCAAAAATACTCAAACCAGACCTCATAGCTCCAGGGGTCAACATCCTAGCCGGGTGGACCGGTGCAGTTGGACCAACCGGCTTGACTGAAGACACCAGACGTGTCCAATTCAACATCATCTCGGGCACTTCCATGTCATGCCCTCATGTCAGTGGCTTGGCTGCCCTTATTAAGGGCACTCACCCAGAATGGAGCCCTGCAGCTATAAGGTCTGCCCTCATGACCACATCCTACATAGCCTACAAAAATGGCCAAACCATCAAAGACATCGCCACCGGACTACCGGCCACACCGTTCGATTATGGGGCTGGACACGTCGATCCGGTGGCTGCTTTTGATCCCGGCCTTGTGTATGACACTACCGTGGATGACTACTTGGGCTTTTTCTGTGCCTTGAACTACAATTCAAATCAAATAAAGCTTGTTGCGAGAAGAGACTTTACCTGCAGCAAAAGGAAGAAATACAGAGTGGAAGATCTCAATTACCCATCTTTTGCTGTTCCTTTCAACACTGCTTACGGAGTAAAGGGTGGTTCTGGCAAACCGGTCACTGTCCAGTATACAAGGACTTTAACAAACGTGGGTGCCCCAGCAACGTATAAAGTTTCGGTGGTGTCGCAGTCTGCCTCGGTGAAGATTGTGGTTCAACCACAAATACTTAGTTTCGGGGCACTGAATGTGAAGAAGAACTATACAGTTACGTTCACGTCTTCTTCAAAGCCTTCTGGAACGAACAGCTTTGCTTATCTGGAATGGTCGGATGGGAAACATAAGGTTACTAGTCCCATTGCATTCAGCTGGACTTAA 2304 0.4822 MDKLNMLISLLLVFSSRHIIAEKKTTPHGTKSTYIIHMDKLNMPESFNDDHLLWYDSSLKSVSDSAEMLYTYKKVAHGYSTRLTTQEAESLSKHQGVLSVIPEVRYELHTTRTPEFLGLAKYTTLSLPSGKQSDVVVGVLDTGVWPELKSFVDTGLGPVPSSWKGECEKGKNFNPSNCNKKLIGARFFSKGYEAAFGPIDEKTESKSPRDDDGHGSHTSTTAAGSAVAGASLFGFANGTARGMATQARVATYKVCWNGGCFTSDIAAGIEKAIEDGVNILSMSIGGGLTDYYKDTIAIGTFAATAHGILVSNSAGNGGPSQATLSNVAPWLTTVGAGTIDREFPAYLTLGNGKIYTGVSLYNGKRPPNSLLPIVYAGNVSDESQNRCTRGSLIAEKVAGKIVICDRGGNPRVEKGLVVKSAGGIGMILTNNEDYGEELVADSYLLPAAALGLKSSNEIKKYVFSSPNPTAKLGFGGTQLGVQPSPVVAAFSSRGPNVLTPKILKPDLIAPGVNILAGWTGAVGPTGLTEDTRRVQFNIISGTSMSCPHVSGLAALIKGTHPEWSPAAIRSALMTTSYIAYKNGQTIKDIATGLPATPFDYGAGHVDPVAAFDPGLVYDTTVDDYLGFFCALNYNSNQIKLVARRDFTCSKRKKYRVEDLNYPSFAVPFNTAYGVKGGSGKPVTVQYTRTLTNVGAPATYKVSVVSQSASVKIVVQPQILSFGALNVKKNYTVTFTSSSKPSGTNSFAYLEWSDGKHKVTSPIAFSWT 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1572 767 Gene3D - 628 766 - -
Aed4g1572 767 MobiDBLite consensus disorder prediction 199 221 - -
Aed4g1572 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Aed4g1572 767 MobiDBLite consensus disorder prediction 199 216 - -
Aed4g1572 767 CDD PA_subtilisin_like 346 472 - -
Aed4g1572 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 109 IPR037045 -
Aed4g1572 767 Gene3D - 340 480 - -
Aed4g1572 767 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Aed4g1572 767 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Aed4g1572 767 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Aed4g1572 767 SUPERFAMILY Subtilisin-like 108 615 IPR036852 GO:0004252|GO:0006508
Aed4g1572 767 SUPERFAMILY PA domain 394 435 IPR046450 -
Aed4g1572 767 Pfam Peptidase inhibitor I9 33 109 IPR010259 -
Aed4g1572 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 765 IPR045051 -
Aed4g1572 767 Pfam Subtilase family 133 587 IPR000209 GO:0006508|GO:0008236
Aed4g1572 767 ProSiteProfiles Serine proteases, subtilase domain profile. 105 611 - -
Aed4g1572 767 CDD Peptidases_S8_3 106 577 IPR034197 -
Aed4g1572 767 Pfam PA domain 372 452 IPR003137 -
Aed4g1572 767 Gene3D Peptidase S8/S53 domain 134 624 IPR036852 GO:0004252|GO:0006508
Aed4g1572 767 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 22 765 - -
Aed4g1572 767 Pfam Fibronectin type-III domain 658 763 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1572 Aed-Chr4 20555513 20557816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1572 10 767 Subtilisin-like Serine Gene Family AT5G67360 64.389 0.0 992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1572 4 20555513 20557816 Aed4g1572 4 20555513 20557816 ECH
Aed6g0371 6 3176580 3178901 Aed4g1572 4 20555513 20557816 PCT