Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1570 ATGGCGTCTATTTTTGATCGCTGGGAAAAAGATCCTTTCTTTAGCGCCGCCGAAGAAGTCCAAGAATCTGCAGACAGGATGGAATCTACATATAGAACGTGGATTCATGCAATGAGAGATACGTCCACCCCATGGAACTGTGACGAACTCCGCCGAGATCTTCAAACTACCCTTGGCACTGCTAAATGGCAGTTAGAGGAATTTGAACGAGCAGCTAGGTCAAGTGATAGCAAAGTTTCAAATGAGGATTCAAGAAATAGGCACCGGGATTTTGTTGTTGCCATTGGTGACAAGATTAAGGAAGTTGAGCATTTGTTTCAAGAAGAATCTGTTCATTCAGGTAGCCACAGGGTGTCTGTGCCTTGGACGCGTCTCGATGAAGGAGAACGAGACGAGCTTGCGTCGTTTCTTTCGGGAACATTGGCTACTGTGGGCAAAGGTCCCAATAAATGTGTTGGCAGAGACAGTGAAAGTCTGCAATTAAGTGACAAAGATTGTTCAAGCAATTTACTAGTTTCATCTGATGCAGTGCCCGATAAATCACATGGGCATCGCAGGGCAGCTAGTGCTGATGCCGAAATTGCTTCTTGGAAAATAACTGTTTCTGATGAGGTGCAGCAATCAAGTTCCTCCAATGGTTCTTCTGGTCCTATTCCTCCTATGCATAAGGTAGCCAGTCTCTCTGGATTTTTTGGTTCCATGGAAACCATCTCTAAGTTGAAGTGGCCTAAGAATGGCAATAGAAAGGTGAAAGCAGTAAATCAGTGCGAAGAAATGGATAATGCACCACTAACACCAGCTGGATCGAATGGGGGCAACAATGCATACTTAGAAAGAAATAAGAGTTGCTTTAATAATTGTGATGAACTTTATGATAAGCAACTCCATGGGTGGTATGGGGCTTTGCAAAGGCAGCTTCAAAGATCTCAATACCAAATGCAATACAATCGGCATGTTCAAATAGCCATCTGGGCTGTTATTCTCCTCTGCTTCATTGGTAGGCTACAGATCTTTGTGTTGTGTGTGTCTGCAAAAATATATGCAATTGCATGCTCTCAAATTTGTTAG 1068 0.4335 MASIFDRWEKDPFFSAAEEVQESADRMESTYRTWIHAMRDTSTPWNCDELRRDLQTTLGTAKWQLEEFERAARSSDSKVSNEDSRNRHRDFVVAIGDKIKEVEHLFQEESVHSGSHRVSVPWTRLDEGERDELASFLSGTLATVGKGPNKCVGRDSESLQLSDKDCSSNLLVSSDAVPDKSHGHRRAASADAEIASWKITVSDEVQQSSSSNGSSGPIPPMHKVASLSGFFGSMETISKLKWPKNGNRKVKAVNQCEEMDNAPLTPAGSNGGNNAYLERNKSCFNNCDELYDKQLHGWYGALQRQLQRSQYQMQYNRHVQIAIWAVILLCFIGRLQIFVLCVSAKIYAIACSQIC 355
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1570 355 SUPERFAMILY t-snare proteins 10 104 IPR010989 GO:0016020|GO:0016192
Aed4g1570 355 PANTHER EXPRESSED PROTEIN 1 340 - -
Aed4g1570 355 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Aed4g1570 355 PANTHER OS05G0443700 PROTEIN 1 340 - -
Aed4g1570 355 Gene3D - 9 108 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed4g1570 Aed-Chr4 20551166 20553180 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1570 4 20551166 20553180 Aed4g1570 4 20551166 20553180 ECH
Aed6g0370 6 3169076 3170785 Aed4g1570 4 20551166 20553180 PCT