Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1553 ATGCAGACTCGTGCCGCTGCAAAGAGAAAGGCTAACCATGCCACCTCAGTCATGGTTGAGAAATTGCACCCCAAGAAGCAACGAGTTGTGCTGGGTGAACTTTCCAATTTGCAAAACCTTATTCCCCCCGAAAATCAAACCCCTTGCAAAGAGAAAATCCAATGTCGGAAGAATACCAATGTCAAGAAACCATTTCCCACAAACAACACCCTTTCTCCCCCTTACGTTGACGAACCCTATGTTTCCGACATCGACCACTATCTTCGTGCAATGGAGATGCAGAGAAGGAGAAGACCAATGGTTAATTACATGGACAGAGTTCAGCAGGTAGTTACTGCAAACATGAGAGGAATATTGGTGGATTGGTTAGTGGATGTTGCTGTGGAGTACAAGCTTCTCCCAGAAAGTCTTCATCTCTCTGTGTCATACATTGATAGGTTTTTATCTCTTCATTCTATGAGCAAATCCAGGTTTCAGTTGCTCGGTGTTTCTTCCATGCTCATTGCTACGAAGTATGAGGAAGTTAGTCCACCCCGCGTGGGCAAATTCTGCAGCATCACTGATAACACTTATGAAAAGGAAGAGGTTGTAAAGATGGAAGCTGAAATACTTGAGTCCCTAAATTTTGAAATGGGAAATCCTACTGCAATCACTTTTCTAAGGAGGTTTTTGGGTGTTGCTTCTGAAAACCAAAAAACCCCAAATTTGAAGATTGAATTTCTGAGCTTCTATCTAGCCGAGCTAAGTTTGATGGATTATGATTGTATAAGTTTCTTGCCCTCTACTGTGGCTGCCTCAGTTATATTTCTTGCCAGGTTTATTATCTCGCCTAAAGTGCATCCTTGGACATCTTCTCTGTGGGAATGCTCGGGTTACCATCCAATTGAGTTGAAAGAATGTGTCCTTACCTTGCATGATTTGTATTTTTCAAGAAAGGCGGAGTCCTTCAAAGCTGCTCGAGAGAAATACAAGCAACCCAAGTTCAAATGCGTGGCAAACCTGCCTTCTCCTCCATTTGTACCAAGTGATTACTTTGAAGATCAGTGA 1047 0.4269 MQTRAAAKRKANHATSVMVEKLHPKKQRVVLGELSNLQNLIPPENQTPCKEKIQCRKNTNVKKPFPTNNTLSPPYVDEPYVSDIDHYLRAMEMQRRRRPMVNYMDRVQQVVTANMRGILVDWLVDVAVEYKLLPESLHLSVSYIDRFLSLHSMSKSRFQLLGVSSMLIATKYEEVSPPRVGKFCSITDNTYEKEEVVKMEAEILESLNFEMGNPTAITFLRRFLGVASENQKTPNLKIEFLSFYLAELSLMDYDCISFLPSTVAASVIFLARFIISPKVHPWTSSLWECSGYHPIELKECVLTLHDLYFSRKAESFKAAREKYKQPKFKCVANLPSPPFVPSDYFEDQ 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1553 348 CDD CYCLIN 115 204 IPR013763 -
Aed4g1553 348 PANTHER CYCLIN-A3-1-RELATED 20 347 - -
Aed4g1553 348 SUPERFAMILY Cyclin-like 214 338 IPR036915 -
Aed4g1553 348 SUPERFAMILY Cyclin-like 74 211 IPR036915 -
Aed4g1553 348 SMART cyclin_7 121 205 IPR013763 -
Aed4g1553 348 SMART cyclin_7 218 306 IPR013763 -
Aed4g1553 348 CDD CYCLIN 214 305 IPR013763 -
Aed4g1553 348 Gene3D - 83 333 - -
Aed4g1553 348 Pfam Cyclin, N-terminal domain 86 211 IPR006671 -
Aed4g1553 348 PANTHER CYCLINS 20 347 IPR039361 -
Aed4g1553 348 SMART Cyclin_C_2 214 337 IPR004367 -
Aed4g1553 348 Gene3D - 97 212 - -
Aed4g1553 348 Pfam Cyclin, C-terminal domain 214 336 IPR004367 -
Aed4g1553 348 ProSitePatterns Cyclins signature. 116 147 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1553 Aed-Chr4 20459973 20461808 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1553 3 347 Core Cell Cycle Gene Families AT5G43080 53.824 6.43e-125 361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0363 6 3128633 3130926 Aed4g1553 4 20459973 20461808 PCT