Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1544 ATGGGGGGTTGGGCTATCGCATTGCATGGTGGCGCTGGTGTGGACCCTAATCTCCCACCGCAGCGTCAAGAGCAAGCCAAACAACTCCTTACTCGCGTTCTCAATCTTGGCATCTCTGCCCTTCGTTCCAATGCTTCTGCCCTCGACGTCGTCGAACTTGTCATACGGGAACTGGAAACAGATCCCCTGTTCAACTCTGGTCGCGGATCTGCTCTGACAGAAAAGGGAACGGTGGAAATGGAAGCAAGCATCATGGATGGTTCCAAGAGACGATGCGGCGCCGTTTCGGGTCTCGCCACCGTCAAAAACCCCGTCTCACTCGCTCGCCTTGTCATGGAAAAGTCACCACACTCCTACCTCGCCTTTAACGGTGCTGAAGATTTCGCCAGACAACAGGGTGTGGAGGTTGTGGAGAACGAATACTTCGTCACTCCTGAGAATGTCGGTATGCTGAAACAGGCAAAGGAGGCAAATACGATCATGTTTGATTATAGGATTCCATTGCAAGCGAATGGATACGACATGAGTTGCGGTACAGGTGTGGGTGTGGCGGTGGAGAATCAATTGGTAATGAATGGAGTGCCAATGAGCGTGTACGCGCCGGAGACGGTGGGGTGCGTGGTGGTGGACAGCGAGGGGAGTTGCGCGGCAGGGACGTCGACAGGGGGGCTGATTAACAAGAAGATTGGTAGGATCGGTGACACGCCCCTGATAGGAGCAGGGACTTACGCGTGTAAGGTGTGTGGGGTTTCATGCACTGGGGAAGGTGAGGCTATCATACGTGGCACGCTGGCGCGTGATGTGGCTGCAGTGATGGAATACAAAGGACTGGGACTCCAGCAGGCTGTGGACTTTGTCATCAAGCACCGCCTCGATGGTGGAGGCAAGGCAGGGATAATCGCCGTGTCAAATTCTGGTGATGTGGCGTATGGCTTCAACTCTAATGCCATGTTCAGGGCATGCGCCACTGAGGATGGATTCATGGAGGTTGGAATCTGGGATTAG 1005 0.5433 MGGWAIALHGGAGVDPNLPPQRQEQAKQLLTRVLNLGISALRSNASALDVVELVIRELETDPLFNSGRGSALTEKGTVEMEASIMDGSKRRCGAVSGLATVKNPVSLARLVMEKSPHSYLAFNGAEDFARQQGVEVVENEYFVTPENVGMLKQAKEANTIMFDYRIPLQANGYDMSCGTGVGVAVENQLVMNGVPMSVYAPETVGCVVVDSEGSCAAGTSTGGLINKKIGRIGDTPLIGAGTYACKVCGVSCTGEGEAIIRGTLARDVAAVMEYKGLGLQQAVDFVIKHRLDGGGKAGIIAVSNSGDVAYGFNSNAMFRACATEDGFMEVGIWD 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1544 334 PANTHER L-ASPARAGINASE 1 334 IPR000246 GO:0016787
Aed4g1544 334 Pfam Asparaginase 4 333 IPR000246 GO:0016787
Aed4g1544 334 Gene3D (Glycosyl)asparaginase 203 334 - -
Aed4g1544 334 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 334 - -
Aed4g1544 334 CDD Asparaginase_2 5 326 - -
Aed4g1544 334 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 331 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1544 Aed-Chr4 20401253 20403603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1544 6 288 Miscellaneous Gene Families AT4G00590 26.885 1.09e-15 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0354 6 3074927 3077604 Aed4g1544 4 20401253 20403603 PCT