Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1538 ATGGGTGCTGTTTGTTGTGTTGCTGCTAAAGATAAAACTATACAAAGTGCACCACCCAGTGAAATCTTGCATCGGAATATTCGACATTCTCCAACATGGAACTTCCGGTGGGATCATCGAGGGCGTGTAGCTGGTGAAGATACTGCTGTAACTTGGTTTTCCAACAGTATTAGTGGGAATGGTGGATTGGAGAATAAAAATGAATCCTCGTATGTATTGGAGGATGGAAGCCCATTGCAGAACTATCAAATTCAAAGGAATAGATTTAAAAAATCCCCAATCTCTGAAGAAACTGCTAGAAACATGATAAATTCATCATCTGATCAAACAATGTCAAGGAATGTCTCCTCAAATGTGAGCATAGAACAGGTGAAGGAGTTGGCAGAGTCATCAACTGTATCATGTTCGTATCCCGCAAAACTTCCACATTCATTGCCTTCTACTTCTTTATCAGTATCTCCTCTTCCATCCAGCTCAACGCCATCAAGGTGGCCAAGCCATTCCACAAGACACCAACTATCACGGCAAGTTTCCAATAGCCGAATCTTGGGATTTAAGACACCTAGCAACCTTTATGTATCTGAAGAGAGGCCAGTGTTTCCTTCATGGAGCAATGAATCTGGTATGCACTCCCATAGTGGATCTTCAGATAATTGGTCTAGGCCTGGCTTTTCTGAGCTGACAAGCACTTCCCTAAAAGAAAGATGGTCATTTGACAGTGAGTCATTTGGTTTTAATTGTGAAAGGCTGGTTAGATCCAGTAATCGGTTTTCAAATTCTCCCATTGATTTGCAAACATGTGGTGTTTGCTCAAAACTTTTAACTGAGAAGTCTTCTTGGGGCACCCAAAAGATAATTGCAAGTAATGACCTTTCTGTAGTTTCTGTCCTGATCTGTGGACACGTTTATCACGCTGAATGCTTGGAGAGCTTGACATCTGAAGTCAACAAGTATGATCCACCTTGCCCAGTTTGCACTTTTGGTGAGAAATATACTCATAAGTTGTCTGAAAAAGCTCTGAAAGCCGAAATGGAGTTGAAGGCCAAAAATAGGAAATCAAGGAACCGAATTGTGGACAGTGATATTGAAGATGATTCTGTTGTGTACGAACACTTTAGAGAAAAAGGGCGTCAAGGTAAAGGTCCTAGAATTGGTTCTAGTTCCAGTGGGAAAAGCTCTAATGGGAAACCTTTTCTGAGGAGACACTTCTCATTTGGCTCAAGGAGTTCCAAATCCATGGTGGATAATCAGCCAACCCGGAAGAAGGGATTCTTTTGGGCAAAATCTAGCAAGGAATAA 1299 0.4157 MGAVCCVAAKDKTIQSAPPSEILHRNIRHSPTWNFRWDHRGRVAGEDTAVTWFSNSISGNGGLENKNESSYVLEDGSPLQNYQIQRNRFKKSPISEETARNMINSSSDQTMSRNVSSNVSIEQVKELAESSTVSCSYPAKLPHSLPSTSLSVSPLPSSSTPSRWPSHSTRHQLSRQVSNSRILGFKTPSNLYVSEERPVFPSWSNESGMHSHSGSSDNWSRPGFSELTSTSLKERWSFDSESFGFNCERLVRSSNRFSNSPIDLQTCGVCSKLLTEKSSWGTQKIIASNDLSVVSVLICGHVYHAECLESLTSEVNKYDPPCPVCTFGEKYTHKLSEKALKAEMELKAKNRKSRNRIVDSDIEDDSVVYEHFREKGRQGKGPRIGSSSSGKSSNGKPFLRRHFSFGSRSSKSMVDNQPTRKKGFFWAKSSKE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1538 432 PANTHER BNAA09G43140D PROTEIN 1 426 - -
Aed4g1538 432 SMART ring_2 267 325 IPR001841 -
Aed4g1538 432 SUPERFAMILY RING/U-box 266 326 - -
Aed4g1538 432 MobiDBLite consensus disorder prediction 146 177 - -
Aed4g1538 432 CDD RING-H2 292 325 - -
Aed4g1538 432 PANTHER EXPRESSED PROTEIN 1 426 - -
Aed4g1538 432 MobiDBLite consensus disorder prediction 373 432 - -
Aed4g1538 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 247 327 IPR013083 -
Aed4g1538 432 ProSiteProfiles Zinc finger RING-type profile. 267 326 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1538 Aed-Chr4 20347677 20351951 Dispersed/Transposed