Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1519 ATGGCTACCCTTATTGCTCCCGTCACCTTTTCACCTGGTTTAGATGCAGAAGCTCTTAGAAAAGCTTTCCAAGGATGGGGGACTGATGAGAAAACCGTTATTGCAATATTGGGTCACAGAAATGTTCATCAGAGGCAACAAATCAGAAAGAGAGCTGTGTACCGTTGGATGCTCGAACCTGCGGATCGCGATGCTGTTTTGGCCAATGTTGCAATCAAGAATGGCAGCAAAGGTTACCATGTGATTGTTGAAATTGCTTGTGTGCTTTCACCAGAAGAGATCTTGGCAGTGAGGCGTGCCTATCACAACCGTTACAAGAGATCTTTGGAAGAAGATGTTGCTACTAACACCACTGGTGATATTCGCCAGCTGTTGGTTGGGTTGGTGACAGCATATAGGTATGGTGGTGATGAGATCAATGCAAAATTGGCAAAAACTGAAGCTGATATTCTCCATCAATCTATCAAGGAGAAAAAGGGCAACCATGAAGAAGCCATCAGGATTCTCACCACAAGGAGCAAGATCCAACTTCTTGCAACTTTCAATCGCTACAGAGATGACCATGGTGGTTCCATAACTAAGAAATTGTTGGATAATGCATCTACTGACTTCCAGAAGGCATTGCACACTGCTATTAGATGTCTCAATGACCACAAAAAGTACTATGAAAAGGTTCTGCGCAATGCACTGAAAAATGTTGGAACTGATGAGGATGCACTGACCCGTGTGGTGATCTCAAGGGCTGAGAAGGACCTCAGGGACATCAAAGAGCTCTATTATAGGAGAAACAGTGTTCATCTTGAGGATGCAGTGGCCAAGGAAATCTCAGGGGACTACAAGAAATTCATCCTCACTCTGTTGGGGAAAGAAGATTAG 876 0.4418 MATLIAPVTFSPGLDAEALRKAFQGWGTDEKTVIAILGHRNVHQRQQIRKRAVYRWMLEPADRDAVLANVAIKNGSKGYHVIVEIACVLSPEEILAVRRAYHNRYKRSLEEDVATNTTGDIRQLLVGLVTAYRYGGDEINAKLAKTEADILHQSIKEKKGNHEEAIRILTTRSKIQLLATFNRYRDDHGGSITKKLLDNASTDFQKALHTAIRCLNDHKKYYEKVLRNALKNVGTDEDALTRVVISRAEKDLRDIKELYYRRNSVHLEDAVAKEISGDYKKFILTLLGKED 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1519 291 ProSiteProfiles Annexin repeat profile. 217 288 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 PANTHER ANNEXIN 8 50 - -
Aed4g1519 291 Gene3D Annexin 142 216 IPR037104 GO:0005509|GO:0005544
Aed4g1519 291 PANTHER ANNEXIN 51 291 - -
Aed4g1519 291 Gene3D Annexin 59 130 IPR037104 GO:0005509|GO:0005544
Aed4g1519 291 PANTHER ANNEXIN 51 291 - -
Aed4g1519 291 PANTHER ANNEXIN 8 50 - -
Aed4g1519 291 ProSiteProfiles Annexin repeat profile. 142 213 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 ProSiteProfiles Annexin repeat profile. 59 130 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 ProSitePatterns Annexin repeat signature. 234 286 IPR018252 GO:0005509|GO:0005544
Aed4g1519 291 Pfam Annexin 147 209 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 Pfam Annexin 224 286 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 Pfam Annexin 68 128 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 Pfam Annexin 15 50 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 Gene3D Annexin 219 289 IPR037104 GO:0005509|GO:0005544
Aed4g1519 291 SUPERFAMILY Annexin 3 290 IPR037104 GO:0005509|GO:0005544
Aed4g1519 291 SMART annex3 76 128 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 SMART annex3 159 211 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 SMART annex3 234 286 IPR018502 GO:0005509|GO:0005544
Aed4g1519 291 PRINTS Annexin family signature 274 287 IPR001464 GO:0005509|GO:0005544
Aed4g1519 291 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Aed4g1519 291 PRINTS Plant annexin signature 202 220 IPR009118 -
Aed4g1519 291 PRINTS Plant annexin signature 137 157 IPR009118 -
Aed4g1519 291 PRINTS Plant annexin signature 95 109 IPR009118 -
Aed4g1519 291 Gene3D Annexin 1 55 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1519 Aed-Chr4 20161848 20165068 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1519 4 20161848 20165068 Aed4g1519 4 20161848 20165068 ECH
Aed1g3034 1 26375637 26380248 Aed4g1519 4 20161848 20165068 PCT