Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1516 ATGAAAACAATGTCACGTTCTTCAACTCTTGTTCTAGTTTTATTTTGTCTTTACAACTTGTCTTTCTTAGAGTCTCTAAATAATGGTGGCTTTAGTGTGGAGATCATCCACCGTGACTCATCAAGATCACCATTGTTTCGTCCCACAGAAACTCAATTCCAACGAGTTGCTAACGCCGTGCGTCGTTCCGTTAATCGTGCCAATCATTTCCACACCAACAAAGCTAAGGCCATCATAACACAAGATGATGGTGAATACCTAATGAGCTATTCAGTAGGAACCCCACCATTCCAAATTTATGGTATTGTTGACACAGGGAGTGACATGATTTGGTTGCAGTGTCAACCTTGTAAAACATGTTACAACCAAACAACTTCTATATTTGATCCTTCAAAATCCAACACATACAAAACCCTTCCTTTCTCTTCTACTACATGTCAATCAGTGGAAGATACCACTTGTTCATCTGATCATCATAATGGGAAGAAAATGTGTGAATACACTATTTACTATGGAGATGAATCATACTCAAACGGAGACCTTAGTTTGGAGACTCTCACTTTAGGCTCCACCAATGGCTCTTATGTTCAATTTCCTAGAACTGTGATTGGATGTGGACATAACAATAGTGTGTTATTTGGAGGGAAAGGTTCTGGTGTAGTTGGCCTAGGAAATGGACCTGTGTCACTTGTGAATCAATTGGGACGTTCTTCAATTGGTGGAAAATTTTCATATTGTTTTGCATCAATGTCTAACATATCTAGCAAACTCAATTTTGGAGATGCTGCTGTTGTTTCTGGGGATGGTACTGTCTCAACTCCAATAGCCACACATAACCCTAAAGTATTTTACTACCTAACCTTGGAAGCACTCAGTGTGGGAAACAATAGAATAGAGTTTACAACAAGATCATCATCATCTAGGTTTGGTGGAAATAAGGGAATAAACATCATAATTGACTCAGGTACAACACTCACTCTTTTGCCAAATGATGTTTACTCAAAGTTGGAATCAGCAGTAGCACATGCAGTTAACAAATTAAAGCGTGTTAAGGATCCAACTAAGCAATTGAGCCTTTGCTATAAAATTATTACTTTTGATGATGATGAACTAGATGTGCATGTGCCGGTGATCACAGCACATTTTAGTGGTGCAGATGTGAAGTTAAATGCTGTCAACACCTTTGTAGAAGTGGAAGAAGGGGTAGTATGTTTGGCTTTCATGTCTAGTAAAATTGGTACCATCTTTGGGAATTTGGCTCAGCAAAACTTCTTGGTTGGCTATGACCTACCAAAGAAAATTGTCTCCTTTAAACCTGCAGATTGCAGCAAGCAGTGA 1338 0.3886 MKTMSRSSTLVLVLFCLYNLSFLESLNNGGFSVEIIHRDSSRSPLFRPTETQFQRVANAVRRSVNRANHFHTNKAKAIITQDDGEYLMSYSVGTPPFQIYGIVDTGSDMIWLQCQPCKTCYNQTTSIFDPSKSNTYKTLPFSSTTCQSVEDTTCSSDHHNGKKMCEYTIYYGDESYSNGDLSLETLTLGSTNGSYVQFPRTVIGCGHNNSVLFGGKGSGVVGLGNGPVSLVNQLGRSSIGGKFSYCFASMSNISSKLNFGDAAVVSGDGTVSTPIATHNPKVFYYLTLEALSVGNNRIEFTTRSSSSRFGGNKGINIIIDSGTTLTLLPNDVYSKLESAVAHAVNKLKRVKDPTKQLSLCYKIITFDDDELDVHVPVITAHFSGADVKLNAVNTFVEVEEGVVCLAFMSSKIGTIFGNLAQQNFLVGYDLPKKIVSFKPADCSKQ 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1516 445 CDD pepsin_A_like_plant 85 442 IPR034161 -
Aed4g1516 445 PANTHER OS07G0603500 PROTEIN-RELATED 10 443 - -
Aed4g1516 445 ProSiteProfiles Peptidase family A1 domain profile. 86 438 IPR033121 -
Aed4g1516 445 Pfam Xylanase inhibitor N-terminal 86 261 IPR032861 -
Aed4g1516 445 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 10 443 - -
Aed4g1516 445 SUPERFAMILY Acid proteases 80 443 IPR021109 -
Aed4g1516 445 Pfam Xylanase inhibitor C-terminal 284 438 IPR032799 -
Aed4g1516 445 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 317 328 IPR001969 GO:0004190|GO:0006508
Aed4g1516 445 Gene3D Acid Proteases 260 445 IPR021109 -
Aed4g1516 445 Gene3D Acid Proteases 62 259 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1516 Aed-Chr4 20114392 20115729 Dispersed/Tandem