Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1512 ATGAAGGTGCAAACCGAAACCAAATGCAACACCACAACACTCCACACCCTTCAATGTTTCAATTTATACCATGTGTTCTTTGGGTTGATGGTTGCTGCATTTGACTGTCTTTGTTATCCCTTGAAGCACACTGAGAAAGGCACATCAATGGAGTCTCTAGTTCTTCAACTCCATGAAATCTCAGCTGTCAAATTTGGCAATTTCAAGCTTAAATCTGGCATCTCCTCACCAATCTACATAGACCTCCGCCTTGCTATATCTTATCCTTCCATCCTCTGGAATATTTCTCAAACCCTTATTTCCTCTGTCTCTTCCACTTCATTTGACCTTGTCTGTGGTGTCCCTTACACTGCCCTGCCCATTGCCACTTGTGTCTCTGTTACTCAGAACATCCCCATGGTCATGCGCCGCAAGGAAATCAAAGATTATGGCACCTCTAAAGCCATTGAAGGTGATTTCAAGCACGGTCAAAGTTGCTTGATAATTGAGGATCTAGTTACTAGCGGCACATCAGTTTTGGAAACTGCTGCACCACTGCGCGCTGCAGGGTTGAAGGTCAGTGATGCCGTTGTTTTGATTGATAGAGAGCAAGGTGGGAGACAGAATTTGGAGAGTAATGGAATCAAGCTGCATGCAATTCTTAAATTGACTGAAATGGTGAGAATTTTGAGGGAAAAAGGAAAGGTTGATGAGCAGATGCTAAGGGTTGTTGTGAGATTCTTAGAAGATAATCAGAAGGTCGCTGCTTCGGCAACTACAGTTAAGGTCAAGGCCTTGTCATTTTTGGAGAGGGCTAAGTTGTCCAAGAATCCAACAGGAAAGAGGTTGTTTGAGATAATGGCTGAGAAGGAGAGTAATCTGTGTTTGGCTGCAGATGTTGGAACTGCAGCTGAATTGCTTGAAATTGCTGACAAGGTTGGGTCTGAGATATGTTTGCTGAAAACTCATGTGGATATTTTCCCAGATTTTACTCCTGATTTTGGTTCTAAGCTTCGCTCGATTGCTGAGAAGCATAACTTCTTAATCTTTGAGGATCGTAAATTTGCTGACATTGGTAACACAGTGACCATGCAATACGAAGGAGGAATCTTTCATATATTGGAATGGGCTGATATAGTAAATGCTCACATTATATCTGGTCCTGGAATTGTGGAAGGACTGAAGTTGAAGGGTTTGCCTCGTGGAAGGGGTCTATTGCTGCTTGCTGAAATGAGCTCAGCTGGTAACCTTGCCAAGGGAGATTACACTGCTGCTGCAGTGAAAATTGCTGAGGATCATTCCGACTTTGTAATTGGATTCATCTCAATCAATCCAGCATCATGGCATGGGGCACCCACAAATTCGTCTTTCATTCATGCAACTCCTGGAGTTCAAATGGTTGTCCATGACAGGGGAAGTGACATTATCATCGTAGGTCGTGGCATCATCAAGGCAGCAAATCCAGCTCAGGCAGCTCGCGAATACCGTCTTCAAGGATGGAATGCATATTTGGCAAAGGGCAGTTGA 1506 0.4376 MKVQTETKCNTTTLHTLQCFNLYHVFFGLMVAAFDCLCYPLKHTEKGTSMESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLAISYPSILWNISQTLISSVSSTSFDLVCGVPYTALPIATCVSVTQNIPMVMRRKEIKDYGTSKAIEGDFKHGQSCLIIEDLVTSGTSVLETAAPLRAAGLKVSDAVVLIDREQGGRQNLESNGIKLHAILKLTEMVRILREKGKVDEQMLRVVVRFLEDNQKVAASATTVKVKALSFLERAKLSKNPTGKRLFEIMAEKESNLCLAADVGTAAELLEIADKVGSEICLLKTHVDIFPDFTPDFGSKLRSIAEKHNFLIFEDRKFADIGNTVTMQYEGGIFHILEWADIVNAHIISGPGIVEGLKLKGLPRGRGLLLLAEMSSAGNLAKGDYTAAAVKIAEDHSDFVIGFISINPASWHGAPTNSSFIHATPGVQMVVHDRGSDIIIVGRGIIKAANPAQAAREYRLQGWNAYLAKGS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1512 501 SUPERFAMILY PRTase-like 52 239 IPR029057 -
Aed4g1512 501 TIGRFAM pyrE: orotate phosphoribosyltransferase 57 218 IPR004467 GO:0004588
Aed4g1512 501 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 287 489 IPR014732 GO:0004590|GO:0044205
Aed4g1512 501 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 50 500 - -
Aed4g1512 501 SUPERFAMILY Ribulose-phoshate binding barrel 259 497 IPR011060 -
Aed4g1512 501 CDD OMP_decarboxylase_like 287 488 - -
Aed4g1512 501 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 273 IPR023031 GO:0004588|GO:0006221
Aed4g1512 501 CDD PRTases_typeI 108 215 IPR000836 -
Aed4g1512 501 Pfam Phosphoribosyl transferase domain 104 199 IPR000836 -
Aed4g1512 501 SMART OMPdecase_2 286 488 IPR001754 GO:0004590|GO:0006207
Aed4g1512 501 Gene3D - 40 256 IPR029057 -
Aed4g1512 501 Gene3D Aldolase class I 257 500 IPR013785 -
Aed4g1512 501 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 285 488 IPR001754 GO:0004590|GO:0006207
Aed4g1512 501 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 50 500 - -
Aed4g1512 501 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 342 355 IPR018089 GO:0004590|GO:0006207
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1512 Aed-Chr4 20059704 20064333 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1512 4 20059704 20064333 Aed4g1512 4 20059704 20064333 ECH
Aed1g3026 1 26113594 26118696 Aed4g1512 4 20059704 20064333 PCT