Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1511 ATGATGTCTATACAGAATGAAAATTCTGATACAAAAGAAGTAATAAGTCCGCAGAAAAGGGTAACAAATCTGATGCATCATGCTGGAAACAAGATTTGTGCTGATTGTGGAACACCAGAGCCAAAATGGGTATCTTCAAGTCTTGGAGTATTTATCTGCATCAAATGTTCTGGCATACATAGAAGTCTAGGAGTCCACATATCAAAGGTTCTATCACTGAAGCTAGATGAATGGACAGATGAACAAGTTGATGCATTAGCAAAGTTGGGTGGAAATACACTATTAAATAAGAAGTACGAAGCTTGCCTCCCAAGTACCATAAGAAAACCAAGACCACACTCATCCATTGAGGAGCGCTCTGAATTTATTCGGAGAAAATATGAGATGCAACAATTTATGGAGTGTGATGATAATATGCCAAGCCCTATTCTCCCCGTTGTCCCATCTCAAGAAAGAAGTGTATCAATTGCTCTTGCTCAGAGTAGCTCTTCATACTACAATACTTTTATTGACAAGAAAGCATCTGAAAAACACCAAAGTAAACATCGTATTGGGCACGCATTTCGAAATAGCTGGGGAAGAAAAGATTCTGAGCACAAGTCTTCAAAGAAGAGTACCTCATTGGCAGGTATGGTTGAATTTGTTGGATTGATTAAGGTTAATGTGGTTAAAGGCACTCACTTAGCCGTTCGAGATGTAATGACTAGTGATCCTTATGTCATCCTTTCTTTGGGTCACCAATCAGTAAAAACACGTGTCATAAAGAGCAATTTGAATCCAGTCTGGAATCAAAGCCTAATGCTATCAATTCCAGAAAACATTCCTCCTCTAAAAGTGGATACATTTTCAACTGATGATTTTATGGGGGAGGCTGAAATAGACATCCAACCTCTTGTTATAGCCGCAAGGGCTTACGAGAAATCAAATATCAACGAGTCAATGCAGCTTGGGAAATTTGTAGCGAGCAAGGACAACACCCTTGTTAGAGATGGTATCATATCCCTTGATGATGGGAAGATCAAACAGGAAATCTCAGTGAGGCTACAGAATATTGAGAGAGGTGAGTTGGAGCTTGAGCTTGAGTGTGTTCCTCTTACTCAATAG 1104 0.3949 MMSIQNENSDTKEVISPQKRVTNLMHHAGNKICADCGTPEPKWVSSSLGVFICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALAKLGGNTLLNKKYEACLPSTIRKPRPHSSIEERSEFIRRKYEMQQFMECDDNMPSPILPVVPSQERSVSIALAQSSSSYYNTFIDKKASEKHQSKHRIGHAFRNSWGRKDSEHKSSKKSTSLAGMVEFVGLIKVNVVKGTHLAVRDVMTSDPYVILSLGHQSVKTRVIKSNLNPVWNQSLMLSIPENIPPLKVDTFSTDDFMGEAEIDIQPLVIAARAYEKSNINESMQLGKFVASKDNTLVRDGIISLDDGKIKQEISVRLQNIERGELELELECVPLTQ 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1511 367 Gene3D Arf GTPase activating protein 2 139 IPR038508 -
Aed4g1511 367 Pfam Putative GTPase activating protein for Arf 19 134 IPR001164 GO:0005096
Aed4g1511 367 ProSiteProfiles ARF GTPase-activating proteins domain profile. 18 140 IPR001164 GO:0005096
Aed4g1511 367 SMART arf_gap_3 15 140 IPR001164 GO:0005096
Aed4g1511 367 Gene3D C2 domain 214 367 IPR035892 -
Aed4g1511 367 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 213 303 IPR035892 -
Aed4g1511 367 Pfam C2 domain 217 298 IPR000008 -
Aed4g1511 367 PRINTS HIV Rev interacting protein signature 30 49 IPR001164 GO:0005096
Aed4g1511 367 PRINTS HIV Rev interacting protein signature 70 91 IPR001164 GO:0005096
Aed4g1511 367 PRINTS HIV Rev interacting protein signature 49 66 IPR001164 GO:0005096
Aed4g1511 367 SUPERFAMILY ArfGap/RecO-like zinc finger 18 133 IPR037278 -
Aed4g1511 367 CDD ArfGap 24 127 - -
Aed4g1511 367 ProSiteProfiles C2 domain profile. 199 314 IPR000008 -
Aed4g1511 367 SMART C2_3c 217 307 IPR000008 -
Aed4g1511 367 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 14 367 - -
Aed4g1511 367 CDD C2_ArfGAP 215 354 - -
Aed4g1511 367 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 14 367 IPR044518 GO:0005096|GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1511 Aed-Chr4 20028989 20033945 Wgd