Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed4g1506 | ATGGTTTTTGCAGCTCATAGTGATAGCCATGGTGCAAAAAGAATACGAAAGCTTACTCAAAGGAAAGCAGTTGATTATACAAGCACCGTTGTGCGTTATATGCAGATTCGTATGTCGCAGCGGGATTTAAGGGATAGGACAGTACTGCAACCCACCCTGGCAGCGGCAATTGATATGTTGCCAGCAGTTGGCTATCCAGACAATCCATCCACAAGCTTTGCTTCTAAATTTGTTCATACATCTTTAAATAAAAATCGTTGCCCCATTAATCGCGTTCTTTGGACTCCAACAGGCCGGCGACTTATTACTGGTTCACAGACTGGGGAATTCACTCTTTGGAATGGACAATCTTTTAATTTTGAAATGATTCTTCAGGCGCATGATCAAGCAATCAGATCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGGACAGATTTGAAGTTCTGTTCGTGCTCTGATGATACCACAGTTAAAGTTTGGGATTTTGCACGCTGTCAAGAAGAGTGTTCACTAACTGGCCATGGTTGGGATGTGAAGAGTGTTGACTGGCATCCTACAAAATCCCTATTAGTATCAGGTGGGAAGGACAATCTTGTGAAACTTTGGGATGCTAAATCAGGGAGAGAGCTGTGCTCATTTCATGGCCACAAAAATACTGTGCTGTGTGTCAAATGGAATCAAAATGGCAACTGGGTGTTAACAGCTTCAAAAGATCAAATAATAAAGCTTTATGACATTAGAGCAATGAAGGAACTTGAATCGTTCCGTGGGCATCGCAAGGATGTTACTAGATATGCTGACCAAAATCCTGTTGCTGGTCGGATGGGTGGTAATTTTCCTATAGCTGAAGGCCCAACCACTCCAGGACCATTTGCCCCTGGGTTGACTCGAAATGAGGGTACCATTCCCGGTGTTGGAGTTGCAATGCCCTTGTCTATTCCTTCTCTTGACATGCCTCAAGGGGAGCAGAAGCAGCCCCATCCTGGTTCAATGGGTGCTCCTCCTCTTCCCCCAGGTCCACACCCCTCCCTTCTTAATCCCAACCAACAGCAACCATACCAACAGAATCCTCAGCAGATCCCACAACATCAACACCAGCAGATGGGTGGTCCTTTGCCTATGCCTCCAAATATGCAACAGCTACAGCACCCTTCCCATTCACCCTTCCCAAATATGCCTCGTCCTCCACCCCAAATGCCTATTGGCATGCCAGGATCTATACCAGGGATTTCATCAGTGCCTACATCGCATCCAATGCCGATGCCAGGTCCAATGGGGATGCAAGGGGCGATGAATCAGATGGGTACTCCAATGCCACAAGGTCCTTACGTAGGCATGAATCAAATGCATTCAGGATCCTTGCCTACAAGTGGAGGGCCACCACTTGGTGGTTTTCCTGGCAACTTGCCTAATATGCAAGGGCCATCAAATGCCAATTATCCTCAAGGTGCTTCATTTAACAGACCTCAAGGTGGCCAAATGCCTCTGATGCAAGGCTATAATCCTTACCAGTCTGGTAATCAATCTGGGATGCCTCCAAACGCACAACCATAG | 1656 | 0.462 | MVFAAHSDSHGAKRIRKLTQRKAVDYTSTVVRYMQIRMSQRDLRDRTVLQPTLAAAIDMLPAVGYPDNPSTSFASKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVSGGKDNLVKLWDAKSGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKELESFRGHRKDVTRYADQNPVAGRMGGNFPIAEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPGSMGAPPLPPGPHPSLLNPNQQQPYQQNPQQIPQHQHQQMGGPLPMPPNMQQLQHPSHSPFPNMPRPPPQMPIGMPGSIPGISSVPTSHPMPMPGPMGMQGAMNQMGTPMPQGPYVGMNQMHSGSLPTSGGPPLGGFPGNLPNMQGPSNANYPQGASFNRPQGGQMPLMQGYNPYQSGNQSGMPPNAQP | 551 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed4g1506 | 551 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 82 | 114 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | Gene3D | - | 65 | 201 | IPR015943 | GO:0005515 | |
| Aed4g1506 | 551 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 205 | 246 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 124 | 156 | - | - | |
| Aed4g1506 | 551 | MobiDBLite | consensus disorder prediction | 504 | 551 | - | - | |
| Aed4g1506 | 551 | MobiDBLite | consensus disorder prediction | 484 | 551 | - | - | |
| Aed4g1506 | 551 | PRINTS | G protein beta WD-40 repeat signature | 182 | 196 | IPR020472 | - | |
| Aed4g1506 | 551 | PRINTS | G protein beta WD-40 repeat signature | 266 | 280 | IPR020472 | - | |
| Aed4g1506 | 551 | PRINTS | G protein beta WD-40 repeat signature | 224 | 238 | IPR020472 | - | |
| Aed4g1506 | 551 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 205 | 242 | - | - | |
| Aed4g1506 | 551 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 247 | 288 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | MobiDBLite | consensus disorder prediction | 341 | 423 | - | - | |
| Aed4g1506 | 551 | PANTHER | WD40 REPEAT PROTEIN | 6 | 300 | IPR045245 | GO:0031124 | |
| Aed4g1506 | 551 | PANTHER | WD40 REPEAT PROTEIN | 303 | 547 | IPR045245 | GO:0031124 | |
| Aed4g1506 | 551 | MobiDBLite | consensus disorder prediction | 380 | 400 | - | - | |
| Aed4g1506 | 551 | MobiDBLite | consensus disorder prediction | 364 | 379 | - | - | |
| Aed4g1506 | 551 | SUPERFAMILY | WD40 repeat-like | 74 | 297 | IPR036322 | GO:0005515 | |
| Aed4g1506 | 551 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 224 | 238 | IPR019775 | - | |
| Aed4g1506 | 551 | Gene3D | - | 202 | 300 | IPR015943 | GO:0005515 | |
| Aed4g1506 | 551 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 124 | 156 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 247 | 281 | - | - | |
| Aed4g1506 | 551 | Pfam | WD domain, G-beta repeat | 242 | 279 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | Pfam | WD domain, G-beta repeat | 122 | 155 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | Pfam | WD domain, G-beta repeat | 167 | 195 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | Pfam | WD domain, G-beta repeat | 203 | 237 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | SMART | WD40_4 | 240 | 279 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | SMART | WD40_4 | 198 | 237 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | SMART | WD40_4 | 70 | 114 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | SMART | WD40_4 | 159 | 195 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | SMART | WD40_4 | 117 | 156 | IPR001680 | GO:0005515 | |
| Aed4g1506 | 551 | CDD | WD40 | 86 | 297 | - | - |