Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1503 ATGGATGAGATTTTGAAGGAGAGAGAGACAAATCGAGCTAAGATTGACCAGATTTTTACTGGTTCAGCTGGATCAGTTTTGAGCACTTTGGTGAGGACTCATGACAACCAGGAGGTTAATTCTCAAGTGTTGAGCTGGCTTGTCATACATTATGCCAAGTCAAAGATGACACAGGATGCAATTCAAGTTTTTGAGCAGATGAGGTTACATGAAGTCAAACCTCATTTGCCTGCTTGTACTGTACTTTTGAACTCCTTGTTGAAGGATGGGGTTACTCACATGGTGTGGAAAATTTACAAGAGAATGGTTCAAGTTGGGGTTGTTCCCAATATGTACATTTACAATTGTTTATTCCATGCTTGTTCAAAAGCACGAGATGTGGAAAGGGCAGAACAGTTATTAAATGAGATGGATGTAAAGGGTGTGCTTCCTGATATCTTCACATATAATACTTTGATATCGTTATATTGCAAGAAAGGCATGCACTATGAGGCTTTATCCATCCAGAACAGAATGGAAAGAGAGGGGATCAACCTTGATATTGTTAGTTATAACTCTCTTATTTATGGATTTTGCAAAGAAGGCAGAATGAGAGAAGCTATGAGGATGTTTAGTGAAATACAAAATGCAACTCCCAATCACGTGACATATACTACATTGATTGATGGTTATTGCAAAACAAATGAACTGGAAGAAGCTCTGAAAATGCGTGAAATGATGGAGGCTAAGGGATTGTACCCTGGAGTTGTTACTTATAATTCAATTTTGCGCAAGCTGTGTCAAGATGGCAGGATAAGGGATGCAAACAAAATCTTGAATGAAATGAGTGAAAGGAAAATTCAAGCTGACAATATCACGTGCAACACACTTATTAATGCTTACTGCAAGATTGGAGATTTGAAATCAGCTTTGAAATTTAAGAACAAGATGATAGAAGCTGGTCTTAAACCTGATCCATTTACTTATAAGGCACTGATTCATGGGTTCTGCAAGACAAATGAGCTGGAAAATGCAAAGGAGTTAATGTTCAGCATGCTTGATGCTGGATTTACCCCCAATTATTGCACGTACTCATGGATTGTAGATGGCTATAATAAGAAAGCCAATATGGAGGCAGTTTTAGCACTTCCAGATGAGTTTCTGAGTAGATGTCTTTGTCTTGATGTTTCAGTATACAGGGCATTGATAAGAAGGTTATGCAAGGTAGAAAGAATTGAATGTGCTGAAAGGTTATTCAATCATATGGAAGGAAAGGGTATATCAGGTGAAAGTGTTATCTACACCAGTCTTGCATATGCTTATTGGAAATTAGGGAATGTTTACCCACAGGAATTTCAACGAGTTGTGAAGAATTTCAACTTGAAAGAGTATTGGCACTTGGGCCCTTGTTCAATGTATCTTGGGGTGTTGCATTATCTGTTTGATTGTGATGTAACAAAGCATGATATAAAATTGTCAACAGTCAATACTATTTTGAAAAGATTCTTTTGA 1491 0.3749 MDEILKERETNRAKIDQIFTGSAGSVLSTLVRTHDNQEVNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLPACTVLLNSLLKDGVTHMVWKIYKRMVQVGVVPNMYIYNCLFHACSKARDVERAEQLLNEMDVKGVLPDIFTYNTLISLYCKKGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIQNATPNHVTYTTLIDGYCKTNELEEALKMREMMEAKGLYPGVVTYNSILRKLCQDGRIRDANKILNEMSERKIQADNITCNTLINAYCKIGDLKSALKFKNKMIEAGLKPDPFTYKALIHGFCKTNELENAKELMFSMLDAGFTPNYCTYSWIVDGYNKKANMEAVLALPDEFLSRCLCLDVSVYRALIRRLCKVERIECAERLFNHMEGKGISGESVIYTSLAYAYWKLGNVYPQEFQRVVKNFNLKEYWHLGPCSMYLGVLHYLFDCDVTKHDIKLSTVNTILKRFF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1503 496 Pfam PPR repeat 384 416 IPR002885 -
Aed4g1503 496 SUPERFAMILY TPR-like 183 346 IPR011990 GO:0005515
Aed4g1503 496 Pfam PPR repeat family 283 331 IPR002885 -
Aed4g1503 496 Pfam PPR repeat family 212 256 IPR002885 -
Aed4g1503 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 180 210 IPR002885 -
Aed4g1503 496 TIGRFAM PPR: pentatricopeptide repeat domain 250 283 IPR002885 -
Aed4g1503 496 TIGRFAM PPR: pentatricopeptide repeat domain 285 318 IPR002885 -
Aed4g1503 496 TIGRFAM PPR: pentatricopeptide repeat domain 147 180 IPR002885 -
Aed4g1503 496 TIGRFAM PPR: pentatricopeptide repeat domain 391 421 IPR002885 -
Aed4g1503 496 TIGRFAM PPR: pentatricopeptide repeat domain 215 248 IPR002885 -
Aed4g1503 496 TIGRFAM PPR: pentatricopeptide repeat domain 320 353 IPR002885 -
Aed4g1503 496 TIGRFAM PPR: pentatricopeptide repeat domain 79 110 IPR002885 -
Aed4g1503 496 TIGRFAM PPR: pentatricopeptide repeat domain 182 208 IPR002885 -
Aed4g1503 496 TIGRFAM PPR: pentatricopeptide repeat domain 112 146 IPR002885 -
Aed4g1503 496 Gene3D Tetratricopeptide repeat domain 310 382 IPR011990 GO:0005515
Aed4g1503 496 Gene3D Tetratricopeptide repeat domain 168 238 IPR011990 GO:0005515
Aed4g1503 496 Gene3D Tetratricopeptide repeat domain 239 309 IPR011990 GO:0005515
Aed4g1503 496 Gene3D Tetratricopeptide repeat domain 383 454 IPR011990 GO:0005515
Aed4g1503 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 248 282 IPR002885 -
Aed4g1503 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 318 352 IPR002885 -
Aed4g1503 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 110 144 IPR002885 -
Aed4g1503 496 Gene3D Tetratricopeptide repeat domain 18 167 IPR011990 GO:0005515
Aed4g1503 496 PANTHER ATPASE EXPRESSION PROTEIN 3 22 440 - -
Aed4g1503 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 40 74 IPR002885 -
Aed4g1503 496 Pfam Pentacotripeptide-repeat region of PRORP 42 192 IPR033443 -
Aed4g1503 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 388 422 IPR002885 -
Aed4g1503 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 145 179 IPR002885 -
Aed4g1503 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 283 317 IPR002885 -
Aed4g1503 496 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 22 440 - -
Aed4g1503 496 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 213 247 IPR002885 -