Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed4g1500 | ATGGCAGAAGCCGCAATTTTCTTCGTCGCCGTCAACACAGAAACTCCATTCTTAACATTCCTCAATCGCACCTTTCTCTCCATCAAACGACGCATTCTCCGCTATCAAAACGACGCCGTAGAACACTCCGGCAGGCAAGTGGTCATTTCTCTTATTCTGCATCTCTCTCTCTATATATCTCTCGAGTTTCTCACGACGACGTCGTTTGTTTGTGGCTGCAGGATTATTTTCTGCGACGTGGATGCGGCCATTGAGAAACACTGCGAAGTGAACGCGGGAGATTGTTTGTCGAACGACGAGAGTTTCGGCGCCGACGGGAATGGACGGCACGGCGTTTTCAATGCGTTGGATACTATGCTTAGGGACAGTTTAGAGCGTCTTAAGATGATGAGGGAAAACCTATGTTTGGTAAAAACAGGCCTAACTATAGGATATGCATGTGAATCCAAGTATGCTGAACATACAGCCACTATTAGGTGTTTGTGCTTAGATAGTAAGTTGGGAGCAGCTGTTTGGCTTCGGGGGAAAATGGCACAGAAAGGTGCTGTTCCTGATGTGTTTACCCACAACCATATTGTAAATGGGCTGTGCAAAATTGGTCTTCTGGAAAAGGCGGATTTGGTTATTAGAGAGATGTTAGAATTTGGTCCTCGTCCCAACTGTGCCACTTATAACACTTTGATTAAGGGCTATTGCGATGTTGATGGTGTGGATAAGGCTTTGTATCTGTTCTCCACCATGGCCTATGCTGGGATTCAGCCAAACAGGGTTACTTGTCGCATACTGGTGCATGCGCTGTGTGAGAAACGTCTTCTGATGGAATCTAAAAGGATGCTTGAAGAAATATTAAAGGATGATGACGACAAAGATATACCTGATTTAGTTACCTCTACTATATTTATGGATAGCTACTTTAAGAATGGAGCAATTATTCAGGCTCTCAATCTTTGGAATCAGATGCTTCAAAATTGTACTGAAGTTGATGTTGTAGCTTATAATGTTCTTATCAATGGATTTTGCAAGAGTCAACAAATGAACCTTGCATATGGATACGCATGTGAGATGTTTAAGAAAGGTTTACTTCCTGATGCTTTTACTTATAATATTCTTATTGGTGCTCTTTGCAAGGAAAGAAAAATTAGTGAGGCTTGCTATACTCTTGGAGTTATGTCTAATATGGGAATTATGCCGGATCAAATTACATACCAGAGTGTGATTCGAGGCCTTTGTTTTGATGGAGAGATTGTTAGAGCAAAAAACTTGCTATGGTGTATGTTGAACAATTTAATGGTGCCCAAGCCTTTAATATGGAACCTAATAATTGACTTATACGGGAGATATAATGATCTTAGTAATGCATTTTTTACAAGAGATCAGATGCTGGCTTTCGGTGTTTTCCCCAATGTATTTACTTATAATGCTTTAATTCTTGCACAAGTGAAGAGTGAAAATTTCTATGGTGCTTGCACTCTGAAGGAAGAGATGATTTTAGAAGGTCTCTTTCCTGATGTGGTTACCTATAATTTGTTGATGGGTGCTGCTTGTAATAAAGGACGTCCTGATTTTGCTCTTCAATTATATGATGAGATGGTGCAGAGGGGGTATGAACCAGATTTAATAACTTATACTGAACTTGTTAGGGGGTTCTGTATTAGAGGAAAGATGAAAGATGCAGAAGAGCTCTATGCCAAAATACTAAAATCTGGTTTGTTGAATGATCACGTTCCAGTTCAGATTCTTTTTAATAAGTACTGCAAATTGGAGGAACCAGTTAGAGCATTTCACTTTTATCAAGACTGGTTGGAAAGTAAAAAGGGTAATCTTCCTTAA | 1830 | 0.4011 | MAEAAIFFVAVNTETPFLTFLNRTFLSIKRRILRYQNDAVEHSGRQVVISLILHLSLYISLEFLTTTSFVCGCRIIFCDVDAAIEKHCEVNAGDCLSNDESFGADGNGRHGVFNALDTMLRDSLERLKMMRENLCLVKTGLTIGYACESKYAEHTATIRCLCLDSKLGAAVWLRGKMAQKGAVPDVFTHNHIVNGLCKIGLLEKADLVIREMLEFGPRPNCATYNTLIKGYCDVDGVDKALYLFSTMAYAGIQPNRVTCRILVHALCEKRLLMESKRMLEEILKDDDDKDIPDLVTSTIFMDSYFKNGAIIQALNLWNQMLQNCTEVDVVAYNVLINGFCKSQQMNLAYGYACEMFKKGLLPDAFTYNILIGALCKERKISEACYTLGVMSNMGIMPDQITYQSVIRGLCFDGEIVRAKNLLWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFFTRDQMLAFGVFPNVFTYNALILAQVKSENFYGACTLKEEMILEGLFPDVVTYNLLMGAACNKGRPDFALQLYDEMVQRGYEPDLITYTELVRGFCIRGKMKDAEELYAKILKSGLLNDHVPVQILFNKYCKLEEPVRAFHFYQDWLESKKGNLP | 609 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed4g1500 | 609 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 328 | 362 | IPR002885 | - | |
| Aed4g1500 | 609 | TIGRFAM | PPR: pentatricopeptide repeat domain | 223 | 255 | IPR002885 | - | |
| Aed4g1500 | 609 | TIGRFAM | PPR: pentatricopeptide repeat domain | 540 | 570 | IPR002885 | - | |
| Aed4g1500 | 609 | TIGRFAM | PPR: pentatricopeptide repeat domain | 505 | 538 | IPR002885 | - | |
| Aed4g1500 | 609 | TIGRFAM | PPR: pentatricopeptide repeat domain | 330 | 364 | IPR002885 | - | |
| Aed4g1500 | 609 | TIGRFAM | PPR: pentatricopeptide repeat domain | 187 | 221 | IPR002885 | - | |
| Aed4g1500 | 609 | TIGRFAM | PPR: pentatricopeptide repeat domain | 365 | 398 | IPR002885 | - | |
| Aed4g1500 | 609 | Pfam | PPR repeat | 436 | 465 | IPR002885 | - | |
| Aed4g1500 | 609 | Pfam | PPR repeat | 295 | 323 | IPR002885 | - | |
| Aed4g1500 | 609 | Pfam | PPR repeat | 470 | 500 | IPR002885 | - | |
| Aed4g1500 | 609 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 538 | 572 | IPR002885 | - | |
| Aed4g1500 | 609 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 185 | 219 | IPR002885 | - | |
| Aed4g1500 | 609 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL | 73 | 604 | - | - | |
| Aed4g1500 | 609 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 220 | 254 | IPR002885 | - | |
| Aed4g1500 | 609 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 503 | 537 | IPR002885 | - | |
| Aed4g1500 | 609 | Pfam | PPR repeat | 393 | 422 | IPR002885 | - | |
| Aed4g1500 | 609 | Pfam | PPR repeat | 180 | 212 | IPR002885 | - | |
| Aed4g1500 | 609 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 468 | 502 | IPR002885 | - | |
| Aed4g1500 | 609 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 363 | 397 | IPR002885 | - | |
| Aed4g1500 | 609 | Gene3D | Tetratricopeptide repeat domain | 441 | 607 | IPR011990 | GO:0005515 | |
| Aed4g1500 | 609 | Gene3D | Tetratricopeptide repeat domain | 287 | 440 | IPR011990 | GO:0005515 | |
| Aed4g1500 | 609 | Gene3D | Tetratricopeptide repeat domain | 215 | 286 | IPR011990 | GO:0005515 | |
| Aed4g1500 | 609 | Gene3D | Tetratricopeptide repeat domain | 105 | 214 | IPR011990 | GO:0005515 | |
| Aed4g1500 | 609 | PANTHER | PPR CONTAINING PLANT-LIKE PROTEIN | 73 | 604 | - | - | |
| Aed4g1500 | 609 | Pfam | PPR repeat family | 219 | 267 | IPR002885 | - | |
| Aed4g1500 | 609 | Pfam | PPR repeat family | 328 | 376 | IPR002885 | - | |
| Aed4g1500 | 609 | Pfam | PPR repeat family | 502 | 550 | IPR002885 | - |