Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1498 ATGGAGGAAAATCCCCCTTCATGCGATTTAGACAGGACCGTCATGGGGATCAAATTTGGTATGGCCACACGCCAAGAAATTTGTACAGCATCCATTAGTGACTCTTCGATTAGTCATGCTAGTCAGCTGTCGAATCCATTCCTTGGGCTGCCCCTTGAATTTGGAAGATGTGAATCGTGTGGAACATCTGAAGTTGGAAAATGCGAGGGTCACTTTGGATATGTTGAGCTACCAGTTCCGATATATCATCCTAGTCATATTAGTGAATTGAAACGGATGCTGAGCCTGTTTCCAGCTTCAAGCAGTGGCTTAGCACAGAGAATAATGTCTCCTTGTTGTCAGGAGCTTAATGCTGCTCTAGTTTCTATTCGGGATGTTAAAACAAGTGACGGGGCTTGTTATCTGGCACTGAAAGTATCCAAATCCAAGATGCAGGATGGTTTTTGGAGTTTCTTGGAAAAATATGGCTATCACTATGAGGGAGATCACACTCGAGCCTTGCTTCCTTGTGAGGCAATGGAAATTATTAAGAGAATTCCAATAGAGACCAAAAAAAAACTTGCTGGAAAAGGATATTTTCCTCAAGATGGATATGTTTTGAAGTATCTTCCGGTGCCACCAAATTGCTTGTCTGTGCCAGAAGTTTCAGATGGTGTCAGTGTCATGTCGTCGCCTGCTGCTATAGAGGGCATAGTCTGTACACCTTTCTTTTCTCTCTCAGTGTACTTGGTTTTGCCTCTTTTGGATCCTTCCATGACAATTCTTAGGAAATTGCTCAGGAAGGTTGAAATCATCAAAAGTTCTAGATCTGGTGAACCAAATTTTGAGTCACATCACGTGGAAGCAAATGATTTGCAGTCAGTGGTTGATCAGTATTTTCAAATTAGGGGCACTTCTAAGCCAGCACGTGATATAGAGACACATTTTGGGGTCAATAAAGAGCTTACTGCATCGTCAACAAAAGCATGGCTTGAGAAAATGCGGACATTATTTATAAGAAAAGGTTCAGGTTTTTCTTCCAGGAATGTGATAACTGGAGATGGTTATAAGAGGATTAATGAAGTAGGAATTCCTGTTGAAGTTGCCCAAAGAATTACATTTGAGGAGAGAGTTAACATCCATAACATAAGTTATTTACAGAAGTTGGTTGATGAAAATTTGTGCCTGACCTACAAGGAAGGTGTGTCAACTTATTCACTCAGGGAGGGCTCAAAGGGGCACATATATCTTAAGCCTGGTCAGATAGTGCATCGGAGGATTATGGATGGGGATATTGTCTTTATCAACAGACCACCTACAACACACAAACACTCTTTACAAGCACTTTATGTCTACATCCATGATGACCACACTGTGAAAATAAATCCTTTAATTTGTGGACCACTTGGGGCTGATTTTGATGGTGACTGTGTCCATCTGTTTTATCCGCAGTCACTTGCTGCTAAAGCTGAAGTTGTGGAGCTATTTTCTGTGGAGAATCAGCTGCTCAGCTCTCACAGTGGTAATTTGAACCTACAGTTGTCCTCAGATTCGTTGTTGTCACTGAAGTTGTTGGTCAAGAGATGTTTTTTTGATAGAGCGGCAGCTAATCAATTAGCGATGTTTCTTTTGCTACCTTTGCCTCAGCCTGCTTTGCTCAAGGCCAGTTCTGGTGATTCTTGTTGGACTTCCATCCAAATTTTACAGTGTGCTTTACCTTTGTGTTTTGATTGCACTGGGGGACGGTATTTGATTAGGCAGAGTGAAATCTTGGAATTTGATTTCAGCAGGGATGTTCTGCCTGCAACAATAAATGAAATAGCAGCCTCAATTTTCTTTGGCAAGGGTCCCAAGGAGGCACTTAATTTCTTTGATGTATTGCAACCCTTTTTGATGGAAAGCTTATTTGCTGAAGGGTTCAGTGTTAGCCTGGAAGAGTTTTCAATATCTAGGGCAATCAAAAGAATAATAAGAAGAAGCATTGGAAAAGTTTCTTCTCTGCTGTATCAGCTGAGGTCCTTATACAATGAGCTGGTAGCGCAGCAACTGGAGAAGCACATTCGTGATGTTGAACTTCCTATCATTAATTTTGCTCTAAAGTCAACTAAATTAGGAGATTTAATTGATTCAAAGAGTAAATCTGCTATTGATAAGGTTGTTCAGCAGATTGGGTTCTTAGGGCAGCAACTTTTTGATATGGGGAGATTCTACTCAAAGGGATTGGTAGAAGATGTAGCATCCCATTTTCATGTGAAGTGTTGTTATGATGGGGATGGTTATCCCTCTGCTGAGTATGGACTGCTCAAAGGGTGTTTTTTTAATGGTTTGGATCCGTATGAAGAGATGGTGCATTCCATTTCAACGAGGGAAATAATGTTGCGTTCCTCGAGAGGATTATCTGAACCAGGAACCCTCTTTAAGAATTTGATGGCCATCCTTCGGGATGTTGTTATCTGTTATGATGGAACTGTCAGAAACATTTGTAGTAATTCCATTATCCAGTTTGAATATGGGATACAAGCTGGAGACAAAACTGAGCACTTATTCCCTGCTGGTGAGCCTGTAGGTGTCTTGGCTGCAACTGCTATGTCAAATCCTGCTTACAAAGCTGTCCTTGATGCTAGTCCTAGTAGCAACTCTTCATGGGAGTTGATGAAGGAAATATTACTCTGCAAGGTCAATTTTAGGAATGAACCTGTTGATCGGCGTGTAATTTTGTACTTGAATGACTGTGATTGTGGAGGGAGTTATTGCCGGGAAAATGCGGCATATTCAGTTAAAGATCAATTGAGAAAAGTTAGTCTCAAGGATGCAGCAGTGGAGTTCATTATTGAGTACCAACAACAACGAACTGAAAAGGAAAATTCTGAAACTGATGCTGGACTCGTTGGTCATATTTATCTGGATGAGATGATGTTAGAGGAGCTGAAGATCAGCATGGCCAATGTTTTCCAAATATGCAAAGACAGACTCAAGTCTTTTAGTCGGAAAAAGAAAGTTCATCAATCTTTGAAGGACACTGAATTATCGTTTAGTGAGTCCTGCACATCTTCACATTCTGCTGCACCATGTTTAACATTTTGGATAAAGAATCATGATAGTGATTTAGATAAATATGTAAAGGACCTGTCCGAAAAGATCTGCCCTCGTGTTGCAGCATCTGTGAAAATGGTGGCAAAAGGTGTACTGAGAGAGCATCTAATTCTGTTAGCTAGTAGTATGACATGTGGTGGGAACTTGGTTGGCTTTAATACAGGTGGATATAAAGCTTTGTCTCGTCAATTAAATATACAAGTACCATTCACCGATGCAACACTCTTTACACCTAAAAAGTGTTTTGAGAGAGCTGCTGAGAAATGCCATACTGATTCTCTGTCAAGCATAGTTGCCTCCTGTTCTTGGGGTAAACATGTGGCAGTTGGTACAGGATCAAAGTTTGATGTTGTTTGGGATGCAAACGAGATAAAATCAAAAGAAATTGAAGGGATGGATGTTTACAGTTTTCTTAACATGGTGAAAAGCTTTACCAATGGGGAAGAAGAATCTGATGCTTGTTTGGGTGAAGATATTGATGATTTGCTGGAAGAAGAATATATGGACTTGGGAATGTCCCCACAACATAACTCTGGTTTTGAAGCTGTCTTTGAAGAGAATCCTGAAGTGGTGAATGGTTCAACATCCAATGGTTGGGATGCAAGTTCAAATCAGACAGAATCAAAAACCAATGAGTGGTCAGGTTGGACAAGTAACAAAGCTGAAATAAGAGATGGCAGATCTGAAAGTGCCCCAGAGGATTCTTGGGGGAAAACTGTCAACCAAGAAGACTCTTCCAAGTCTGACGCTTGGAATACAAGAACCACAACAGATCAGACAAAAACTAAATCTAATGAATGGTCTGCTTGGGGAAGTAATAAGTCTGAAGTACGAGCTGGTGGATCTAAAGTAGTCCAAGAAGACAATTCCAGGTCTGGTGCTTGGGATGCAAATGCAGCAGATCAGACAAAAACTAAATCTAATGAATGGTCTGCTTGGGGAAGTAATAAGTCTGAAGTACCAGCTGGTGGATCTAAAGTAGTCCAAGAAGACAATTCCAGGTCTGGTGCTTGGGATGCAAATGCAGCAGATCAGACAAAATCTAATGAGACCGGCTGGGGAAAGAGGAAAGACAATGGTACCCAAGAAGACAATTCTGGGGCTGGTGCTTGGGGTGCCAACAGAACAGAACAGACAAAAACTTCAAGCTGGGGAAAGAACAAGTCTGAAATATCAGCTGGGGGATCTGAAAATGTGCAGAATGATTCATGGGGCTCTGGTAAGAGGAAAGACAATGTTACCCAAGAAGACAGTTCTGGGGCTGGTGCTTGGGGTGCCAACAGAACAGATCTGACAAAAACGTCCAGCTGGGGAAGGAACAAGTCTGAAATATCAGCTGGTGGATCTGAAAATGTGCAGGATACTTGGGGCTCTGGTAAGAGGAAAGACAATGTTGCCCAAGAAGACAATTCTGGGTCTGGTGCTTGGGGTGCCAACAGAACAGATCTGACAAAAACGTCCAGCTGGGGAAGGAACAAGTCTGAAATACCAGCTGGTGGATCTGAAAATGTGCAGAATGATTCATGGGGCTCGGGTAAATTGAAAGATGATACCCAAAAAGAAAATTCCGTGTCTGGTGCTTGGGGTGAAAATTCTGGGTCTGCATGGGCGAGAAATAAAGCTGAAACAGTAGATGGTGGGTCAGAAAAGCCCCAAGAGGATGGCTGGAACTCTGGTAATTGGAAAGCTGAATCAAAAGTTGGCAATAGCTCTTGGGGAAAACTCAAATCCTCAGAAAGCCAAGCATGGGATCCCCATAGTCAGGAAAATCAAAATTCAGGCTCACAAAAGCCCCAAGAGGATGCCTGGAACTCTGGTAATCGGAAAGCTGAATCAAAAGTTGGTAATACCTCTTGGGGAAAACCCAAATCCTCAGAAAGTCAAGCATGGGATTCCCATAGTCAGGCAAATCAAAATTCAGGTTCACAGGGATGGGAATCACATATTGCTTCAGCTAATTCAGAAAATGAGAAAGGTTTTCAGTGGGGAAAGCAAGGTAGAGACTCGTTTAAGAAAAATCGATTTGAAGGTTCGCAAGGTCGAGGTTCAAATGCTGGCGACTGGAAAAATAGGAATCGCCCACCTAGAGCACCTGGACAGAGAATGGACATATACTCATCTGAGGAGCATGATGTTCTGAAGGATATTGAACCCATTATGCAGTCTATCAGACGAATCATGCAACAACAGGGGTACAATGATGGAGACCCGTTGGCTGCGGAAGATCAACTTTTTGTACTTGAGAATGTCTTTGAGCACCACCCAGATAAAGAAACCAAAAAGGGTGCTGGAATTGACTATGTCATGGTTAACAAACACAGTAGCTTCCAGGATAGTAGATGCTTTTATGTGGTTTGTAAAGATGGTGAAAACAAAGACTTTTCATACCGCAAGTGTTTGGGTAACTATATAACCAAGAAGTATCCTGACCTTGCTGAATCTTTCCTTGGGAAATATTTTCGGAAACCTCGTCCAAGGCCGGACCAGACTGCAACACCAGGGGGAGACCAGGCTGCAACGCCAGGGAGGGATGAGGCAGCCACTCCGGGTGAGCAGACTGCAACACCAGGCCAGGATGAAGCGGCAACCCCGGGTGAGCAGATCTCAACGCCCGACCCCATCCCTATGGAAACCAATGAGTAG 5715 0.4245 MEENPPSCDLDRTVMGIKFGMATRQEICTASISDSSISHASQLSNPFLGLPLEFGRCESCGTSEVGKCEGHFGYVELPVPIYHPSHISELKRMLSLFPASSSGLAQRIMSPCCQELNAALVSIRDVKTSDGACYLALKVSKSKMQDGFWSFLEKYGYHYEGDHTRALLPCEAMEIIKRIPIETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPEVSDGVSVMSSPAAIEGIVCTPFFSLSVYLVLPLLDPSMTILRKLLRKVEIIKSSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASSTKAWLEKMRTLFIRKGSGFSSRNVITGDGYKRINEVGIPVEVAQRITFEERVNIHNISYLQKLVDENLCLTYKEGVSTYSLREGSKGHIYLKPGQIVHRRIMDGDIVFINRPPTTHKHSLQALYVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVENQLLSSHSGNLNLQLSSDSLLSLKLLVKRCFFDRAAANQLAMFLLLPLPQPALLKASSGDSCWTSIQILQCALPLCFDCTGGRYLIRQSEILEFDFSRDVLPATINEIAASIFFGKGPKEALNFFDVLQPFLMESLFAEGFSVSLEEFSISRAIKRIIRRSIGKVSSLLYQLRSLYNELVAQQLEKHIRDVELPIINFALKSTKLGDLIDSKSKSAIDKVVQQIGFLGQQLFDMGRFYSKGLVEDVASHFHVKCCYDGDGYPSAEYGLLKGCFFNGLDPYEEMVHSISTREIMLRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNICSNSIIQFEYGIQAGDKTEHLFPAGEPVGVLAATAMSNPAYKAVLDASPSSNSSWELMKEILLCKVNFRNEPVDRRVILYLNDCDCGGSYCRENAAYSVKDQLRKVSLKDAAVEFIIEYQQQRTEKENSETDAGLVGHIYLDEMMLEELKISMANVFQICKDRLKSFSRKKKVHQSLKDTELSFSESCTSSHSAAPCLTFWIKNHDSDLDKYVKDLSEKICPRVAASVKMVAKGVLREHLILLASSMTCGGNLVGFNTGGYKALSRQLNIQVPFTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSKEIEGMDVYSFLNMVKSFTNGEEESDACLGEDIDDLLEEEYMDLGMSPQHNSGFEAVFEENPEVVNGSTSNGWDASSNQTESKTNEWSGWTSNKAEIRDGRSESAPEDSWGKTVNQEDSSKSDAWNTRTTTDQTKTKSNEWSAWGSNKSEVRAGGSKVVQEDNSRSGAWDANAADQTKTKSNEWSAWGSNKSEVPAGGSKVVQEDNSRSGAWDANAADQTKSNETGWGKRKDNGTQEDNSGAGAWGANRTEQTKTSSWGKNKSEISAGGSENVQNDSWGSGKRKDNVTQEDSSGAGAWGANRTDLTKTSSWGRNKSEISAGGSENVQDTWGSGKRKDNVAQEDNSGSGAWGANRTDLTKTSSWGRNKSEIPAGGSENVQNDSWGSGKLKDDTQKENSVSGAWGENSGSAWARNKAETVDGGSEKPQEDGWNSGNWKAESKVGNSSWGKLKSSESQAWDPHSQENQNSGSQKPQEDAWNSGNRKAESKVGNTSWGKPKSSESQAWDSHSQANQNSGSQGWESHIASANSENEKGFQWGKQGRDSFKKNRFEGSQGRGSNAGDWKNRNRPPRAPGQRMDIYSSEEHDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENVFEHHPDKETKKGAGIDYVMVNKHSSFQDSRCFYVVCKDGENKDFSYRKCLGNYITKKYPDLAESFLGKYFRKPRPRPDQTATPGGDQAATPGRDEAATPGEQTATPGQDEAATPGEQISTPDPIPMETNE 1904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1498 1904 SMART rpolaneu7 196 519 IPR006592 GO:0003677|GO:0003899|GO:0006351
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1214 1242 - -
Aed4g1498 1904 PANTHER DNA-DIRECTED RNA POLYMERASE 186 1035 IPR045867 GO:0003899|GO:0006351
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1214 1725 - -
Aed4g1498 1904 Pfam RNA polymerase Rpb1, domain 3 494 638 IPR007066 GO:0003677|GO:0003899|GO:0006351
Aed4g1498 1904 PANTHER DNA-DIRECTED RNA POLYMERASE 1039 1226 IPR045867 GO:0003899|GO:0006351
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1545 1562 - -
Aed4g1498 1904 Gene3D RNA polymerase II, clamp domain 7 125 IPR044893 -
Aed4g1498 1904 Gene3D - 1734 1828 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1492 1536 - -
Aed4g1498 1904 Pfam Protein of unknown function (DUF3223) 1755 1824 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1844 1904 - -
Aed4g1498 1904 Gene3D RNA polymerase Rpb1, domain 3 499 634 IPR042102 -
Aed4g1498 1904 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 14 1146 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1685 1699 - -
Aed4g1498 1904 Gene3D RNA polymerase ii 366 418 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1258 1296 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1875 1889 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1352 1373 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1387 1432 - -
Aed4g1498 1904 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 186 1035 - -
Aed4g1498 1904 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 1 1039 1226 - -
Aed4g1498 1904 Pfam RNA polymerase Rpb1, domain 2 337 490 IPR000722 GO:0003677|GO:0003899|GO:0006351
Aed4g1498 1904 Gene3D - 334 498 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1577 1684 - -
Aed4g1498 1904 Gene3D - 808 839 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1309 1339 - -
Aed4g1498 1904 MobiDBLite consensus disorder prediction 1452 1484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1498 Aed-Chr4 19801435 19818812 Dispersed/Transposed