Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1488 ATGACCATGAAGAAAGCCACCCCTTTGGTGCTCTTCCTCCTCCTCCACCTCTTCTCCCTAACCAAAGCCCTTCACCACCCTCAACAAGACCATGGCTCAACCCTCAAAGTGTTCCATGTGTTAAGGCACTCATCAAATGCAATGTCATGGGAGGAGAGTGTCCTAGAGCTAGAAGCCAAGGACCAAGCCAGGGTTCAGTACTTGTCAAGCTTGGTGGCTAGGAGGTCCATTGTCCCAATTGCCTCAGGGAGGCAAATCACACAGAGCCCTACTTACATTGTCAAGGCCAAGATTGGTACCCCTCCTCAGACCCTCCTCTTGGCCATGGACACTAGCAGTGATGCTGCTTGGGTCCCTTGCACTGCTTGTGTTGGCTGCTCAGCCACCACACCCTTTACTCCTGACAAGTCCACCTCTTTCAGGAACGTTGGATGTGGTGCCTCTCGGTGCAGACAGGTACGGAACCCCACTTGCGACGGAAGCGCGTGTGCATTCAACTTCACCTATGGCACTTCCTCAGTTGCAGCCAACCTCGTTCAAGACACAGTGACCCTAGCCACTGACCCGGTCCCCGCCTACACCTTTGGGTGCATTCAAAAGGCAACAGGGACCTCACTGCCACCACAGGGGCTATTGGGGCTGGGCCGAGGCCCATTATCACTCTTGGCCCAAACCCAACATCTCTACCAATCTACATTCTCCTACTGCTTGCCCAGCTTCAAGACACTCAACTTTAGTGGGTCGTTGAGACTTGGGCCTGTGGCCCAGCCCAAGAGGATCAAATTCACACCTCTTCTCAAAAATCCTAGAAGATCTTCACTCTACTATGTGAACTTGGTGGCTATTAGGGTTGGCCGGAAAATTGTGGATATTCCTCCGGAGGCTCTAGCGTTCAACGCTAACACCGGTACGGTATTCACCCGGCTGGTTGAACCGGCCTACACCGCACTCCGAAATGAGTTTCGACGACGAGTTGCCATTGGCAAGAAACTCACCGTGACAAGTCTAGGAGGGTTTGACACATGTTACAACGTCCCAATAGTCGCACCAACCATAACATTCATGTTCTCAGGCATGAATGTGACGCTCCCGCCGGACAACACCCTCATACACAGCACCGCTGGTAGCCTCACGTGCCTGGCCATGGCGCCGGCCCCCGACAACGTCAACTCAGTGCTGAACGTGATTGCCAACATGCAGCAACAAAACCACCGTGTGCTCTTTGATGTGCCCAACTCTAGGGTTGGTGTTGCTCGTGAGCTTTGCACCTAA 1272 0.5338 MTMKKATPLVLFLLLHLFSLTKALHHPQQDHGSTLKVFHVLRHSSNAMSWEESVLELEAKDQARVQYLSSLVARRSIVPIASGRQITQSPTYIVKAKIGTPPQTLLLAMDTSSDAAWVPCTACVGCSATTPFTPDKSTSFRNVGCGASRCRQVRNPTCDGSACAFNFTYGTSSVAANLVQDTVTLATDPVPAYTFGCIQKATGTSLPPQGLLGLGRGPLSLLAQTQHLYQSTFSYCLPSFKTLNFSGSLRLGPVAQPKRIKFTPLLKNPRRSSLYYVNLVAIRVGRKIVDIPPEALAFNANTGTVFTRLVEPAYTALRNEFRRRVAIGKKLTVTSLGGFDTCYNVPIVAPTITFMFSGMNVTLPPDNTLIHSTAGSLTCLAMAPAPDNVNSVLNVIANMQQQNHRVLFDVPNSRVGVARELCT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1488 423 PANTHER ASPARTYL PROTEASE AED3-LIKE 10 423 - -
Aed4g1488 423 PANTHER ASPARTYL PROTEASES 10 423 IPR001461 GO:0004190|GO:0006508
Aed4g1488 423 Gene3D Acid Proteases 253 423 IPR021109 -
Aed4g1488 423 Pfam Xylanase inhibitor C-terminal 275 416 IPR032799 -
Aed4g1488 423 ProSiteProfiles Peptidase family A1 domain profile. 92 418 IPR033121 -
Aed4g1488 423 SUPERFAMILY Acid proteases 90 422 IPR021109 -
Aed4g1488 423 Gene3D Acid Proteases 69 252 IPR021109 -
Aed4g1488 423 Pfam Xylanase inhibitor N-terminal 92 252 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1488 Aed-Chr4 19665154 19668717 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1488 4 19665154 19668717 Aed4g1488 4 19665154 19668717 ECH