Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1477 ATGGTGGATTTTAGTGCAACTGGGACTAGTTATTATTTATTTTTTTTCATTTGGGGCATCTGGGGTGGTGTCAAATTGGTCTTTTTCTTCTCAGAGTGTGTTGCTTTGACTTTGAAGCACTTCGTTTGGTGTGGTGTGTTCTCATTTTCCGTGAGTTGGGCTTGTGGGTACACAGGATGTGGTGGTGAGAATGATGTATGGGGAGTAGAACTACCAGGGTTGTTGTTGGTGTTGAAGATGACAACGGAGCTGAAAGAGGGATGCCGAGCTTCAATTCCGAGTTACCCATTTCCAATTCATGAGGGGAGCACAATTGATTCTTTTCATGTTTCTGACTTTGGAACATTTGGCCAGTCATATCGCATAGAGGATGCTGTTGACCTCAGTGGAATAAATAGCCAAGCAATTTCTCCGGGTTCGGTTCAAATTAGTAGCCTTGATCAGTTGCCAACTTCACTTGAAAAAAGCCCATTGACGAATCAAACAGAGCTGCATAGGTTGCGATTACAGAAGGTTCAATCATCAAATCCTGGCACAATATTAGTTGGTAATACAGATAACCAGGAGTCTGCCATGGCCGATGCCAGTCCTAGGACTGATATTTCTACAGATGGTGACACCGATGACAAGAATCAGCCATTTGATAGAAATCAAGCCCTCGCTGCTGTTTCTGACTCTAGTGACAGATCGAAAGATAAATCAGATCAGAAGTCTCTCCGCAGGCTTGCTCAGAACCGTGAAGCTGCCAGAAAAAGCCGCTTGAGAAAGAAAGCGTATGTCCAACAGTTGGAAAGTAGTCGTTTGAAGCTGACCCAACTCGAGCAAGAGCTTCAGCGAGCTAGGCAGCAGGGGATTTTCATATCAAGCTCAGGTGATCAAGCACATACATTGAGTGGAAATGGGGCAATGCAATTTGATGCAGAATATGCAAGGTGGCTGGAAGAGCAGAATCGACAAATTAATGAGCTGAGAGCAGCTGTGAACTCTCATGCAAGTGACACCGAACTTCGCATGATCGTTGATGGTATAGTGGCACATTATGATGAGATTTTTAGGCTGAAAGGTGTTGCAGCTAAGGCTGATGTTTTCCATTTGTTGTCTGGTATGTGGAAAACACCTGCTGAGAGGTGTTTTTTGTGGCTTGGTGGTTTTCGCTCGTCTGAACTCCTCAAGCTGCTGGTGAGTCAATTGGAGCCTTTGACCGAGCAGCAGCTGATGGATATTACCAACTTGCAGCAATCCTCTCAACAAGCAGAAGATGCATTGTCTCAGGGCATGGAAGCATTGCAACAGTCCCTTGCTGAGACATTGTCCACCGGAGCACCTGCTTCATCTGGTTCATCGGGGAACGTGGCAAATTACATGGGTCAAATGGCCATGGCCATGGGTAAGCTAGGGACACTTGAAGGGTTCATTCGACAGGCTGACAATCTTCGGCAGCAAACTCTTCAACAAATGCACCGTATACTGACAACTCGCCAATCAGCTCGCGCACTCCTCGCTATACATGACTACTTTTCACGGCTGCGTGCTCTCAGTTCACTCTGGCTGGCTCGCCCACGAGATTGA 1569 0.4627 MVDFSATGTSYYLFFFIWGIWGGVKLVFFFSECVALTLKHFVWCGVFSFSVSWACGYTGCGGENDVWGVELPGLLLVLKMTTELKEGCRASIPSYPFPIHEGSTIDSFHVSDFGTFGQSYRIEDAVDLSGINSQAISPGSVQISSLDQLPTSLEKSPLTNQTELHRLRLQKVQSSNPGTILVGNTDNQESAMADASPRTDISTDGDTDDKNQPFDRNQALAAVSDSSDRSKDKSDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGIVAHYDEIFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMDITNLQQSSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRD 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1477 522 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 235 279 IPR004827 GO:0003700|GO:0006355
Aed4g1477 522 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 133 522 - -
Aed4g1477 522 Pfam Basic region leucine zipper 233 279 IPR004827 GO:0003700|GO:0006355
Aed4g1477 522 Pfam Seed dormancy control 319 395 IPR025422 GO:0006351|GO:0043565
Aed4g1477 522 Gene3D - 236 287 - -
Aed4g1477 522 ProSiteProfiles DOG1 domain profile. 302 519 IPR025422 GO:0006351|GO:0043565
Aed4g1477 522 SMART brlzneu 233 296 IPR004827 GO:0003700|GO:0006355
Aed4g1477 522 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 240 255 IPR004827 GO:0003700|GO:0006355
Aed4g1477 522 PANTHER TRANSCRIPTION FACTOR TGA9 133 522 - -
Aed4g1477 522 SUPERFAMILY Leucine zipper domain 237 280 IPR046347 GO:0003700|GO:0006355
Aed4g1477 522 CDD bZIP_HBP1b-like 237 289 - -
Aed4g1477 522 MobiDBLite consensus disorder prediction 169 253 - -
Aed4g1477 522 MobiDBLite consensus disorder prediction 226 249 - -
Aed4g1477 522 Coils Coil 313 333 - -
Aed4g1477 522 MobiDBLite consensus disorder prediction 169 197 - -
Aed4g1477 522 Coils Coil 256 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1477 Aed-Chr4 19451401 19459637 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed4g1477 DOG1 4.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1477 4 19451401 19459637 Aed4g1477 4 19451401 19459637 ECH