Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1458 ATGGCATTGCTCAATATGTTTTATTTTCAGTCACAAAATGAGCACCTTCCATTTTTAACCAATTTTTGTTCCCTCCCTTTATCTCCAACCCCTCTCTTTGGGTGTCAATTTGTTTGCGAGGGTTTTGCAATGGGGGCAACTAAAGAGGCCACACAAAATCATGTACATGTAAAATTTGTTGATGAAGAAAATCCAGATATTATCAAAGTTAGTGGTGATACATATATTCCAATTAATGTTAAAGTTAGTGGCGTAGAAGATCATATAGTAAATGATAGAGAGAGTGCTCAAAAAACCTCTATTAAGAATAAAAAAGATGATATTCCAAGTGAAATAAAGGAGAAGTTGAAATCTTTGGCAAGTAAGTGGGAGGATGTAGTTGATGTCAATGCATTGCAAGTGATTCCTCTTAAAGGGGCAATGACAAATGAAGTGTTCCAAATAAAATGGCAAACAATAGAAGGAGAATCTTCAAGGAAGGTTCTAGTAAGAATCTATGGTGAAGGTACTGGGATTCTGAGATTAGAATATTTGAATTCATGTCAAAGAGTGGACAAGGACCTCACATTGTCAGCATCTGATATGAGAGATCCATCTATTTCTGCTCTTGTAGCAGCCAAGATGAAGGAGTTTCATGATCTTGATATGCCTGGTCCAACAAATGTGAACCTTTGGGATAGGTTAAGAAACTGGTTTAGTGAAGCGAAGCATTTGTGTTCTCCCGAAGAAATTGAAGCATTTCATTTGGACACAATGGACAAGGAAATATCTACTTTGGAAAACGAATTATCAAACACTCACCAACGCATAGGATTTTGTCACAACGATTTGCAATATGGTAACATAATGCTTGATGAAGTGTCCAATTCTGTAACAATGATTCAACCTAGTGACATTGAAGTGGAGCAGTTGCTTAATGATGTTGAGAAGTATGCACTTGCAAATCATCTATTGTGGGGCGTGTGGGGAATAATTTCGGAACATGTAAATAAAATTGACTTTGACTACAAGGAGTATGCGAAACAAAGGTTTCAAGAGTACTGGTCAAAGAAAACTTATCTTTTGAAGTCTCATGGGTCTTCCCAAAATAACGTGACTAATGTGAAGCAAGAATTAACATCAACTGTCAGCAGAAAACCAACTAGAGGCCGTACTATCCACATGAGATTGAAGAATTTTTTTGGTCTTGGCTTATTCAGATCGAAACGCTAG 1212 0.3688 MALLNMFYFQSQNEHLPFLTNFCSLPLSPTPLFGCQFVCEGFAMGATKEATQNHVHVKFVDEENPDIIKVSGDTYIPINVKVSGVEDHIVNDRESAQKTSIKNKKDDIPSEIKEKLKSLASKWEDVVDVNALQVIPLKGAMTNEVFQIKWQTIEGESSRKVLVRIYGEGTGILRLEYLNSCQRVDKDLTLSASDMRDPSISALVAAKMKEFHDLDMPGPTNVNLWDRLRNWFSEAKHLCSPEEIEAFHLDTMDKEISTLENELSNTHQRIGFCHNDLQYGNIMLDEVSNSVTMIQPSDIEVEQLLNDVEKYALANHLLWGVWGIISEHVNKIDFDYKEYAKQRFQEYWSKKTYLLKSHGSSQNNVTNVKQELTSTVSRKPTRGRTIHMRLKNFFGLGLFRSKR 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1458 403 Gene3D Phosphorylase Kinase; domain 1 109 181 - -
Aed4g1458 403 Gene3D - 185 294 - -
Aed4g1458 403 SUPERFAMILY Protein kinase-like (PK-like) 104 354 IPR011009 -
Aed4g1458 403 Gene3D - 295 365 - -
Aed4g1458 403 Pfam Choline/ethanolamine kinase 189 318 - -
Aed4g1458 403 Coils Coil 249 269 - -
Aed4g1458 403 PANTHER CHOLINE/ETHANOALAMINE KINASE 295 383 - -
Aed4g1458 403 PANTHER CHOLINE/ETHANOALAMINE KINASE 79 294 - -
Aed4g1458 403 PANTHER CHOLINE/ETHANOLAMINE KINASE 295 383 - -
Aed4g1458 403 PANTHER CHOLINE/ETHANOLAMINE KINASE 79 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1458 Aed-Chr4 19115294 19128429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1458 100 357 Acyl Lipid Metabolism Gene Families AT1G74320 42.899 1.34e-82 255
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1458 4 19115294 19128429 Aed4g1458 4 19115294 19128429 ECH
Aed1g2917 1 24593310 24600330 Aed4g1458 4 19115294 19128429 PCT