Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1455 ATGGCCACTGAAAAGCTTAGAGGTTGTGCTAAATTCTTTGCAAGCTCTAAACCCTACTTGGCCATGATCTCTTTGCAATTTGGCTATGCTGGCATGAACATCATCACTAAGGCTTCCCTCAACCAAGGCATGAGCCACTATGTCCTTGTGGTTTATCGCCACGCCTTCGCCACAGCCTCCATCGCTCCGTTTGCCTTTATTTTTGAAAGGAAAGGTCAACCAAAGATAACACTCTCAGTTTTCATGCAAATTTTTGTCCTAGCTCTTCTTGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCCCCAACCTTCGCATGTGCATTGAGCAACATGCTTCCAGCCATGACTTTTGTGATGGCTTTGTGTTGCCGGATGGAGAAAATAGACATAAAGAAGGTGAGATGCATAGCAAAGATAGTGGGAACATTAGTGACAGTGGCAGGAGCTATGTTGATGACCTTATATAGAGGTCCTATAGTGGAGATGCTGTGGGCCAAACATCCACACAATAAAACCAATGCAACAACAACCGCCACAGGAACAATGGACAAAGATTGGCAAAAGCTATACAGACGCACTCTTCAAGCTATTGCTGTTACTTTTGTTGCTGAACACAATCCTTCTGTTTGGAGAATTGGCTGGGATATGAACTTACTTGCTGCTGCATATGCTGGGATTGTGACATCAAGCATATCATACTATGTACAAGGACTGGTAATAAAGAAGAAAGGACCTGTGTTTGCAACTGCTTTTAGCCCTTTAATGATGATCATTGTTGCCATCATGGGCTCCTTTATGCTTGCAGAACAAATTTATCTTGGAGGTGTGGTTGGTGCCATCTTAATTGTCATAGGTTTGTACTCAGTTCTATGGGGAAAGCACAAAGAACAAAGTGAGAGCAAAGTGAGAGATGAAATTCCCTTGCCAATGATTGATGACACAAATAATTTTACTGAAGAAAAATATGGTCAGAAATTAGGAGAACCCAACAACAAGCTGTCTTCAGTAGTAATAACTATGCCTATCACAGAGCCTCCCACGAGAGCTAACCAAGAAGGAAAGGCTTGA 1086 0.4245 MATEKLRGCAKFFASSKPYLAMISLQFGYAGMNIITKASLNQGMSHYVLVVYRHAFATASIAPFAFIFERKGQPKITLSVFMQIFVLALLGPVIDQNFYYAGLKLTSPTFACALSNMLPAMTFVMALCCRMEKIDIKKVRCIAKIVGTLVTVAGAMLMTLYRGPIVEMLWAKHPHNKTNATTTATGTMDKDWQKLYRRTLQAIAVTFVAEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFMLAEQIYLGGVVGAILIVIGLYSVLWGKHKEQSESKVRDEIPLPMIDDTNNFTEEKYGQKLGEPNNKLSSVVITMPITEPPTRANQEGKA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1455 361 PANTHER WAT1-RELATED PROTEIN 198 329 IPR030184 GO:0016021|GO:0022857
Aed4g1455 361 PANTHER WAT1-RELATED PROTEIN 198 329 - -
Aed4g1455 361 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020|GO:0016021
Aed4g1455 361 Pfam EamA-like transporter family 204 296 IPR000620 GO:0016020|GO:0016021
Aed4g1455 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 160 - -
Aed4g1455 361 PANTHER WAT1-RELATED PROTEIN 12 193 IPR030184 GO:0016021|GO:0022857
Aed4g1455 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 208 301 - -
Aed4g1455 361 PANTHER WAT1-RELATED PROTEIN 12 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1455 Aed-Chr4 19081688 19085581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1455 1 350 Nodulin-like Gene Family AT5G07050 58.838 5.28e-162 457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1455 4 19081688 19085581 Aed4g1455 4 19081688 19085581 ECH
Aed1g2894 1 24329333 24333846 Aed4g1455 4 19081688 19085581 PCT