LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g1450	ATGGACACAAACAAAACAAAACCTACCGAACAACAAACCAACAAGTCTGTCAGGTGGAAATTGCCAGAGTTTCGTAAACATGTTGTGAAGAAATGCATGGAAGGAGTAATTATGGAAAGTGGTGTCCCTTTGGCACGTTTATCTGGGCTTGTCCCGTTTCTGGAAAGATTTGAGGCAAAAGTGCATGCTTCTGCCAAAAATGAGGCGGAGTACATTCAATGGTTATCTGAAAAGGTAAAAGAAATAACTTCACGACTAAAATCTTCTGAAACCAAACCTCGTCCCTCAAACTCTACTGGCTCAGCAGAAATCTTATCTGTTCAAGAAGCTGGAAAATCTGCAAATACAGAATGGAAGGAGCAGGTTTATCAAAAGGCTCAAAGGATGAATAGTGCATATTTCCCAAAAGTTAGCGCCATTTACCAACAGATGAGAAAAAAACTTCAAGAGCTCGAGTCTTCTCCTCAAGAACTAAATAAAGTTAATTTGGAAAGAATGAGAAACCATAAGAAAATAGTAGAAAATATTTTGGCAATCTTAAGAGTGAGTAAATGCCAGATAACCATTGACTTCAAGGAGAAACTAGATAAAGCAGAAAAGCTTATAGTAGAAAATTTGATCCCAAAGAATGCTTCTTCACGTCATCAAGGACAACAACATTCAACTGATGTGCAATCTAGGCAACAGTCTAGTCCATCACATTCTAGTGTTTCCCAGATGAAAATGCTTGAAACAAAGCCATCACCACAAGCATTGGGAAAACTGAACTATCATATGGTTGAGGATATTTCTCAGCAAAACAGGATGTGTTTACAAGAGCAGCAAGTGGCAAAACAATTTAGCAATTCACAACAGGATGTACATCAACTGTCTATCATAAAAGGTGCTGGCAATACTATTTGTCATCAAGGACAACAACATGCAGTTGCTGTGCAATCTAGGCAAAAGTCTGGTCCATCACATTCTAGTGTTTCCCCAGTGAAAATACTTGAAACAAAACCATTACCACAGGCATTGGGAAAACTGAATTATCATATGATTGAGGATGCTTCTAAGCAAAACAAGATGCGTTTACAAGAGCAACAAGTGGCAAAACAATATAGCAATTCCCAGCAGGATGTAAAACAACTGTCTATCATAAAAGGTACATCTACCAACTCACTTGGTGTTGTACATTTTGATACTACCTTTTCCATGTTCTCTATTCCAGAGGTTACTAGCCAACATTTTTTACAATTTGTTAAAATCTCAGGCACTGGAAATGCTATTTGTCATCAAGGACAACAACATTCAGTTGATGTGCAATCTAGGCAAAAGTATTCTAGTGTTTCCACGGTGAAAATACTTGAAACAAAACCATCACCACAGGCATTGGGAAAACTGAACTATCATATGATTGAGGATGTTTCTAAGCAAAACAAGATGTGTTTACAAGAGCAACAAGTGACAAAACAATATAGCAATCCACAACAGGATGTAAGACAACTGTCTATCATAAAAGGTACATCTACCAATTCACTTGGTGTTGTACATTTTGATACTACTTTTTCCATGTTCTCTATTCCAGAGGTTACTAGCCAACATTTTTTACAATTTGTTAAAATCTCAGGCACTGGAAATGCTATTTGTCATCAAGGACAACAACATTCAGTTGATGTGCAATCTAGGCAAAAATCTGGTCCACCACATTCTAGTGTTTCCCCAGTGAAAATACTTGAAACAAAACCATCACCACAGGCATTGGGAAAACTGAATTATCATATGATTGAGGATGTTTGTAAGCAAAACAAGATGCATTTACAAGAGCAACAAGTGGCAAAACAATATAGCAATTCCCAGCAGGATGTAAAACAACTGTCTATCATAAAAGGTACATCTAACAATTCACTTGGTGTTGTACATTTTGATACTACCTTTTCCATGTTCTCTATTCCAGAGGTTACTAGCCAACATTTTTTACAATTTGTTAAAATCTCAGGCACTGGCAATACTATTTGTTATCAAGGACAACAACATTCAGTTGATGTGCAATCTAGGCAAAAGTCTGGTCCATCACATTCTAGTGTTTCCCCGGTGATAATACTTGAAACAAAACCATCACCACAAGCATTGGGAAAACTGAACTATCAAATGATTGAGGATGTTTCTAAGCAAAACAAGATGCATTTACAAGAGCAACAAGTGACAAAACAATATAGCAATTCCCAGCAGGATGTAAAACAACTGTCTATCATAAAAGGTACATCTACCAATTCACTTGGTGTTGTACATTTTGATACTACCTTTTCCATGTTCTCTATGTCAGAGGTTACTAGCCAACACTTTTTACAATTTGTTAAAATCTCAGGCACTGGAAATGCTATTTGTCATCAAGGACAACAACATTCAGTTGATGTGCAATCTTGGCAAAAGTTTGGTCCATCACATTCTAGTGTTTCCCCAGTGAAAATACTTGAAACAAAACAATCACCACAGGAATTGGGAAAACTGAACTACCATATGATTGAGGATGTTTCTAAGCAAAACAAGATGTGTTTACAAGAGCAGCAAGTGGCAAAACAATACAGCAATTCGGAACAGAATGTAAAACAACTGTCTATCATAAAAGGCATGGGAGAAACTGTACAACAACAAACACAAGGTGCACAAAAAGCAACTGAAGCATTTAGTGTCAGTGTCAAAAGTCAGGAGATTTCAGGTTCACCCTTGATTGAAAACTGCAATAAGCTTAAAGAAATTTCCCATAAACCTACAGTCACTTCTGATGAGCCAAGTGCTGCAATGCAACGCTTTCTTAAAGTGTTAACCTCCATATCACCCGAAGCATTGAGTGCATCAGTTGGTGAAATTAGAGATGCAGTCTATTTGAATGATGTGACACCAAGTTCAGAATTGATAAATGGACCACCAAATATGGTTCAACAACTAAACCAACCACATGTCATCCCACAAACTGGGGCATATTTGGCATCGGATATTGAGCCATGTTCACAAGCTAGATACATCACTTGCAATGACTTTGTTCCAACTGGAAGGAAAAGGTCTCGCAGCATAAATGCAGTGACAACCTTTGACACTTCTAGTATTTATGCTAGTTCATGTGACAGTAACCAGTTGACAAATGCCAAGAAACCCAACTTGACTTCAGTCACATCTAAAATTAAGAAGCCTAGAATTGTGGAAAAATGTTCTCTTTTAGTAGAAATAAAGGAGATAAATAATCTATTGATAGACAGTGAGATAGTTATTGGAGAAAAAGACAGCACTCCAACTGCAGCTGGAGGAGCTACTGAACACGGTGAAGGATTGGTTATTAAACTCCTTTTCAATGCAGTAACTTTCAATCAGAACCTAACATCCCATCTTTCTGCTGATAAAAAGTCAATAATCAAACCGTTATGGTTGCTTGTTCCTGCAAATTATCCATATTGCCCACCTGTTATTTTAGAGAAAATGCCGTTGGAAGTCAGAAGTGATCAAGGCCTTAAAGATCTATCAACAATAGCAAAATCAAATCTGAGACTTTCTCTCCAACGCTTGAATCAACCCTGGTCACTTAGGGGTATAGCAATGTTATGGGAACGCTGTGCCAGAGAAGCAATCCTTGAGTATGCACAATGCATTGGTGGAGGAACCTTTAGCTCAATACATGGAGGGTGGAAGATGTGTCCAAATTATGCTTAA	3684	0.3768	MDTNKTKPTEQQTNKSVRWKLPEFRKHVVKKCMEGVIMESGVPLARLSGLVPFLERFEAKVHASAKNEAEYIQWLSEKVKEITSRLKSSETKPRPSNSTGSAEILSVQEAGKSANTEWKEQVYQKAQRMNSAYFPKVSAIYQQMRKKLQELESSPQELNKVNLERMRNHKKIVENILAILRVSKCQITIDFKEKLDKAEKLIVENLIPKNASSRHQGQQHSTDVQSRQQSSPSHSSVSQMKMLETKPSPQALGKLNYHMVEDISQQNRMCLQEQQVAKQFSNSQQDVHQLSIIKGAGNTICHQGQQHAVAVQSRQKSGPSHSSVSPVKILETKPLPQALGKLNYHMIEDASKQNKMRLQEQQVAKQYSNSQQDVKQLSIIKGTSTNSLGVVHFDTTFSMFSIPEVTSQHFLQFVKISGTGNAICHQGQQHSVDVQSRQKYSSVSTVKILETKPSPQALGKLNYHMIEDVSKQNKMCLQEQQVTKQYSNPQQDVRQLSIIKGTSTNSLGVVHFDTTFSMFSIPEVTSQHFLQFVKISGTGNAICHQGQQHSVDVQSRQKSGPPHSSVSPVKILETKPSPQALGKLNYHMIEDVCKQNKMHLQEQQVAKQYSNSQQDVKQLSIIKGTSNNSLGVVHFDTTFSMFSIPEVTSQHFLQFVKISGTGNTICYQGQQHSVDVQSRQKSGPSHSSVSPVIILETKPSPQALGKLNYQMIEDVSKQNKMHLQEQQVTKQYSNSQQDVKQLSIIKGTSTNSLGVVHFDTTFSMFSMSEVTSQHFLQFVKISGTGNAICHQGQQHSVDVQSWQKFGPSHSSVSPVKILETKQSPQELGKLNYHMIEDVSKQNKMCLQEQQVAKQYSNSEQNVKQLSIIKGMGETVQQQTQGAQKATEAFSVSVKSQEISGSPLIENCNKLKEISHKPTVTSDEPSAAMQRFLKVLTSISPEALSASVGEIRDAVYLNDVTPSSELINGPPNMVQQLNQPHVIPQTGAYLASDIEPCSQARYITCNDFVPTGRKRSRSINAVTTFDTSSIYASSCDSNQLTNAKKPNLTSVTSKIKKPRIVEKCSLLVEIKEINNLLIDSEIVIGEKDSTPTAAGGATEHGEGLVIKLLFNAVTFNQNLTSHLSADKKSIIKPLWLLVPANYPYCPPVILEKMPLEVRSDQGLKDLSTIAKSNLRLSLQRLNQPWSLRGIAMLWERCAREAILEYAQCIGGGTFSSIHGGWKMCPNYA	1227

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g1450	1227	MobiDBLite	consensus disorder prediction	209	241	-	-
	Aed4g1450	1227	MobiDBLite	consensus disorder prediction	546	568	-	-
	Aed4g1450	1227	PANTHER	OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED	856	1223	-	-
	Aed4g1450	1227	PANTHER	OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A, PUTATIVE-RELATED	106	305	-	-
	Aed4g1450	1227	Gene3D	Coactivator CBP, KIX domain	19	93	IPR036529	GO:0003712\|GO:0006355
	Aed4g1450	1227	PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	106	305	IPR044661	GO:0003713\|GO:0031490
	Aed4g1450	1227	MobiDBLite	consensus disorder prediction	85	106	-	-
	Aed4g1450	1227	MobiDBLite	consensus disorder prediction	89	106	-	-
	Aed4g1450	1227	MobiDBLite	consensus disorder prediction	546	564	-	-
	Aed4g1450	1227	PANTHER	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED	856	1223	IPR044661	GO:0003713\|GO:0031490

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g1450	Aed-Chr4	19022328	19031663	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g1450	4	19022328	19031663	Aed4g1450	4	19022328	19031663	ECH