Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1449 ATGATTAAACACACAGCGAAATCAAAAACAAGAAAAAAGGGAGAGAAAGAGAAAGAGAATAAGGAGGAACAAACCAAACACAGAGTCACCATTCATCATCATCTTCATCAGAGCCTCTGTTCTGTGGTTCATAGGACAAGTATAGAAACCAATATAATGTCTCCATCAGCGAAATCAAAATCCAAGTCCCAGGAGAAGGCATCTGCAAGGGCTGGTAAGGAACAACACAAGACTTCTCCAAAGACTTCCAAGTATCCGACTCTTGGGAGTGGCACTCCTCCTAGTGCACACAATCCCATCTTGGGAACATTTCAAACACCAGAAACATCATTGCTTGCTTCTTCTATTCGAGTTCATGACAGCAGTCATTCCCCAAAACTAGATGACGCAGACGAGAATTCTAGTAGTCCTCAAGGAATGGTGTCTGAGTATGATTCGGTTTCTAACAATGGTAGCTGCTCTGGTGAATCAGAAGAGTCTAAAGAGAAGGCTACAGTAACCAACTCTCCTACTCGGCCAGATAGTATACCTGGTTGTGATAACGACAGAAGGGAGAAGATCCGGTTGAAGAACGAGAGGAAGCACCAGAGGCAGAGGGAAAGGAGAGCTCAGGAGTTGCATGACCGTTGTTGTGGATACCTAATGTCAAGAAAGCTAGAATCACTTGCACAGCAGTTAGTGGCAATGGGGTTCTCTTCTGAGCGAGCAACATTGGCTTTAATGTTAAATGATGGCAAATTAGAGCAATCGGTATCTTGGCTATTTGAAGGGAGTGAAGAACAGTTACAAACGAAGGATACTACCAGTCTTGTAAGTGAGGGTAATATGAAAATTGACATAAGTGGTGAGCTTGCTCAGATATCTGCCTTGGAGGTGAAGTACAACTGTTCAAAGCAAGAGGTTGAAAGAGCAATTGTAGCTTGTGAAGGTGATCTTCAAAAGGCAGAAAACACCGTAAAAACACAGAAGCAGGAATCTCCTACGACCGAATTGAAGTCAGAAGATTCTGCTCAGAATAATAATAGTCTAGTGAGATCACAAGGATTACCGGCAGCATCAGTTTCGATGCAGCACAAAGGGAATGAAAGTGACTTTAACCATTACAACAAAGTTGGTGGTTCTGATTCCATGTTCCCTGGAGTTGAAATCGGGTATGTACATTCCCTACAATTGAATCATCCAAACGTAATGACCGAGAAAAGATGGAGCGGTGTTCCAGGATCAAGCCCTTCTTCTGCTATGTTAGCCATGGCACCATCCATGCGAGCGGCATCTCCATTTGTTAAGATGGAGGGAGGCCGGCCTCTTGCCCTTACAAATGAAGGAAGAATGATCCAACAAGGACTAGGAAGGGAGCCAGTAATGATGCAACATCCACAATTCACAAATGCCAAACAGAACTCTATGATGTCTTTAAATTCCTTTCCTTCGGGAGCAGCAGGTTGGTATGTAAATAGTATTCCTGGTGCTGACAATGTGAGGTCAAACGGGAAGTTACTACAATCTCAAAGCATAAGAAGTGTGAGTCCAAATCATTTGGAGCAATTTTGTCAAGCTCCTTATAAAGAATATTCTCATTTCCATGGACCGGTAGACTACTCGTCAGCCAGGGCAGGTGGTTTCTGCAAGTCAATGGGTGCATCATCATCACCTCCACCTACGATTCCTCCTTGGCATCAAGGTTCATGGACCACGAGCGCACCTTCACCCGCACTCACAGTGCCAACTTCCCTTGGACTGTTTTCTGGTCATCAGAATGCAGCAGCCAGAACAACACTCAGCTCACATTTGCACATGGATTGGAACACCGGGGGCTTGATGCCGGAATTTGACTACACCAGCATAGATTGGAGTTTGAATGCGCCGTCTTCTTCAGTGTCGGGTGGACTGTGGCTAGGGATCTCTTCATTGTTGAGAAACAGTTATGGTGATAGGAGGGCCAATCCATGCATGAGTGGATTGCAAAATGTTGGCATGGCTAGGGAAAGTTCATCATCTGCTGGATTGAGAGAGTGGACCACTCCTTTTGCTGGGAAAGACATATTCAGTGTTCCTAGGCAGTTTGTTACCTCTCCTCCAATGTAG 2085 0.447 MIKHTAKSKTRKKGEKEKENKEEQTKHRVTIHHHLHQSLCSVVHRTSIETNIMSPSAKSKSKSQEKASARAGKEQHKTSPKTSKYPTLGSGTPPSAHNPILGTFQTPETSLLASSIRVHDSSHSPKLDDADENSSSPQGMVSEYDSVSNNGSCSGESEESKEKATVTNSPTRPDSIPGCDNDRREKIRLKNERKHQRQRERRAQELHDRCCGYLMSRKLESLAQQLVAMGFSSERATLALMLNDGKLEQSVSWLFEGSEEQLQTKDTTSLVSEGNMKIDISGELAQISALEVKYNCSKQEVERAIVACEGDLQKAENTVKTQKQESPTTELKSEDSAQNNNSLVRSQGLPAASVSMQHKGNESDFNHYNKVGGSDSMFPGVEIGYVHSLQLNHPNVMTEKRWSGVPGSSPSSAMLAMAPSMRAASPFVKMEGGRPLALTNEGRMIQQGLGREPVMMQHPQFTNAKQNSMMSLNSFPSGAAGWYVNSIPGADNVRSNGKLLQSQSIRSVSPNHLEQFCQAPYKEYSHFHGPVDYSSARAGGFCKSMGASSSPPPTIPPWHQGSWTTSAPSPALTVPTSLGLFSGHQNAAARTTLSSHLHMDWNTGGLMPEFDYTSIDWSLNAPSSSVSGGLWLGISSLLRNSYGDRRANPCMSGLQNVGMARESSSSAGLREWTTPFAGKDIFSVPRQFVTSPPM 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1449 694 Coils Coil 298 325 - -
Aed4g1449 694 MobiDBLite consensus disorder prediction 81 120 - -
Aed4g1449 694 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 53 694 - -
Aed4g1449 694 MobiDBLite consensus disorder prediction 1 38 - -
Aed4g1449 694 Coils Coil 179 199 - -
Aed4g1449 694 MobiDBLite consensus disorder prediction 317 340 - -
Aed4g1449 694 SMART uba_6 219 256 IPR015940 -
Aed4g1449 694 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 53 694 - -
Aed4g1449 694 MobiDBLite consensus disorder prediction 131 155 - -
Aed4g1449 694 MobiDBLite consensus disorder prediction 12 29 - -
Aed4g1449 694 Gene3D - 180 269 - -
Aed4g1449 694 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 217 257 IPR015940 -
Aed4g1449 694 MobiDBLite consensus disorder prediction 52 203 - -
Aed4g1449 694 MobiDBLite consensus disorder prediction 63 80 - -
Aed4g1449 694 SUPERFAMILY UBA-like 220 260 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1449 Aed-Chr4 19016191 19020402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1449 56 693 EF-hand Containing Proteins AT5G12120 35.407 9.02e-85 278