Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1443 ATGGAAACAACAACAAAAAATTCCATGACCCTTTTGAAGATTATTATTATTCTTGGCTTCATGCTGTTCTTCTTCACCAAAACAACAACAAGTGCAGAAACTGCACCAGTTTACAGTTTCAATTATTGTGTGAACTCATCAACTCTTATTAGCCCCTCATACAAGACCAACGTCAACACCCTCCTCACATGGATCACCAATGACTCCTTCACAAGCAAAGGCTTTAACTACATCACTATTGGCAACGACGACGACGGTAATGGCAATACTAGTGATGTTGTTTACGGACAGTACAGCTGCAGATTTGACATCATAGGATATTTCTGCCAGTTCTGTCTCACCACTGCTGTAAATGAAATCTCTAAGCGATGTACTGAAAGTGTAACTGCTCTCTTGTGGTATGATTTCCCCAATATCCAAACACAGGACTCAACAGAAACTAAGAAATTTGAGGATTCTATGGAGGGTTTGATTAAAAAAGCAACTATAGAGACCAAGAATTTTTGGGCAGTGGAGGAGTTCCATTATTGGGGTGACAATGAAACAATGTATGGATGGGTGCAGTGTGATAGGGATCTTCCAAGTGATGAGTGTGGTCAGTGTTTGAATGCTTTGTTAGACATATATCCAAAATGTTGTGGGACAAAAGTACAATGGGCTCTCTACTGTGCTTCAGTGTCTACTGCTTTTGGTACAGGAAAAGAGTTAGAAAAGGCTTGGAACATGTGGTGTGCAGGAAAATGTTTGGAATTGATAGATTCAGCACTAGTGAAATCCTTCATAGCGTGTGAAGTTGAGAAGTGCATACACATTGGTTTGTTGTGTGTCCAACAAGATGCAGCAGATAGACCAACCATGTCCAATGTTGTTCTAATGCTTGGAAGTGACACAATGACCCTTCCAAAACCCACTCACCCTGCATTTTCTGTTGGGAGAATGACCCCAAATGAAGCATCTACTTCAGGAAGTGGCAAGCTTCTTTCCCTTAATGATGTAACAATCTCTGTCACTTTGCCAAGGTAA 1023 0.4076 METTTKNSMTLLKIIIILGFMLFFFTKTTTSAETAPVYSFNYCVNSSTLISPSYKTNVNTLLTWITNDSFTSKGFNYITIGNDDDGNGNTSDVVYGQYSCRFDIIGYFCQFCLTTAVNEISKRCTESVTALLWYDFPNIQTQDSTETKKFEDSMEGLIKKATIETKNFWAVEEFHYWGDNETMYGWVQCDRDLPSDECGQCLNALLDIYPKCCGTKVQWALYCASVSTAFGTGKELEKAWNMWCAGKCLELIDSALVKSFIACEVEKCIHIGLLCVQQDAADRPTMSNVVLMLGSDTMTLPKPTHPAFSVGRMTPNEASTSGSGKLLSLNDVTISVTLPR 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1443 340 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 25 136 - -
Aed4g1443 340 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 142 227 - -
Aed4g1443 340 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 238 337 - -
Aed4g1443 340 Gene3D - 34 140 IPR038408 -
Aed4g1443 340 Gene3D - 141 231 IPR038408 -
Aed4g1443 340 ProSiteProfiles Gnk2-homologous domain profile. 36 146 IPR002902 -
Aed4g1443 340 Pfam Salt stress response/antifungal 51 135 IPR002902 -
Aed4g1443 340 Pfam Salt stress response/antifungal 142 220 IPR002902 -
Aed4g1443 340 Pfam Domain of unknown function (DUF3403) 295 340 IPR021820 GO:0004674
Aed4g1443 340 SUPERFAMILY Protein kinase-like (PK-like) 233 314 IPR011009 -
Aed4g1443 340 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 238 337 - -
Aed4g1443 340 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 136 - -
Aed4g1443 340 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 142 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1443 Aed-Chr4 18959889 18964115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1443 231 340 Receptor kinase-like Gene Family AT4G05200 35.000 1.11e-18 85.5