Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1442 ATGACAACTCTAAGGATTAATATTCTCAGCTTCATGCTCCTCTTCCTCACCACCACAACAAAAGCACAAGCCCCAATTTACATGGTCGATTCTTGCGTGAACCCAACAACTCTTCTTAGCACCTCATACAAAACCAACGTTAAAAAGCTCCTCTCATGGGTAATCGCCGACTCCACCACAAGCAAAGGATATAACCACACCGTCGTAAACAACGACAACGACGGTATTCGCGATGCCGTTTACGGTTTGTACAACTGCAGGGGCGACATAACAGAATACTACTGCCAGTCCTGTGTCAACAATGCTGTGAGCGAAATCTCACGGCGGTGTCCCAACGGCGTAACGGCTATTATATGGTTCGACATATGCTTCCTCCGTTACTCTAACCAAAGTTTTCATGACAAAGTGAGTTTGGATCCAACGTACAATGACTCAACTGAAGTTAAGAAAGCCAAGGATTCTATGGAGGGTTTGATTAGAAAAACGACTATAGAGAGCAAGAACTTTTGGGCAGTGGAGGAGTTTGATTGGGGTGATAATAATAATAATGAGAAAAGGTATGGATGGGTGCAATGCAATAGGGATCTTACAAGTGATAACTGCGGGCAGTGTTTGCACGGTTTGCTAGACATGTTTCCACAATGTTGTGGGACTAAGGTACAATGGGCTGTTTTTTGTCCAAGCTGTGCCCTCAGGATTGATGATAAGGAGTTCTACCAGAATTCAGCAGACAACGGAGGCACTAGTAAGTCAAGAAAGTTGATCATTTCCTTAAGTGTGTTGGGATTAGTAGCTCTACTCTGTTTTAGTGTATACTACTTCTGGCACAAAAATAGACATAGAAAAGCCACACCAGAGTACTCCATGGTAGGAACACAACTAAACCTGCGATCAATATGCTTTGCTTTCTTGTTATTGCTGAGTTTTACACCACTCATCACAATGGTACAAACACCGCTTTATGCTGGACGTAATTGCCAAACAAAAACTCAACCACCTCTCAGTAGTGCATACAAAACCAATCTCAATAGGACCCTCGAATGGATGTCCTCTGATGCAGCCACAAGCAAAGGTTGCAACTTCACCAGCATAGGCAACAACAACAGTGCTGTGTATGGCCTCTATGATTGCCACGGTGACTTGGTTGGATACTTTTGTCAATTCTGTGTTTCAATAGCTGCCAGAGAAGTTCCTCAACGCTGCTCCAATAGTGTGTCTGCTGTAGTTTGGTATGATGCTTGCATTATAAGGTACTCAAATGAGAGCTTCTTTGGGAAAGTTCTGGCATACCCAACATGGCATCATACATTTGGAACAAAAAACATATCCAACATGGCAGAGATTCAGCAAGGTGAGGATTTTGTGAAGAGTTTGATCAGAAAAGCAACTGTAGAGACCAATCAGTTGTACTATATGGATGGCTTCAATTTGAGTTCCACTCAGAGAAGGTATGTCACAGCTAAACAACAAGAGGATAATATGAGGTCAAAAATCTTGATCATTAGCTTCAGTGTGATGGGGTCAATAACTCTACTATGTTTCAGTGTTTATTGCTTCTGGTACAGGAGTAGGCCTAGAAAAGAGTATGCTATGGAAGGATTATTTTCGGTGAAATCTGATGTTTTCAGCTTCGGAGTTCTTATTTTAGAAATAATTTGTGGTAAAAAGAACAGTGGATTCTATCTATCAGAATGTGGTGAAAGTCTTCTTTTATATGTGAGTTTTCTCTCTTACCTGATGATCAAGGCATGA 1752 0.4167 MTTLRINILSFMLLFLTTTTKAQAPIYMVDSCVNPTTLLSTSYKTNVKKLLSWVIADSTTSKGYNHTVVNNDNDGIRDAVYGLYNCRGDITEYYCQSCVNNAVSEISRRCPNGVTAIIWFDICFLRYSNQSFHDKVSLDPTYNDSTEVKKAKDSMEGLIRKTTIESKNFWAVEEFDWGDNNNNEKRYGWVQCNRDLTSDNCGQCLHGLLDMFPQCCGTKVQWAVFCPSCALRIDDKEFYQNSADNGGTSKSRKLIISLSVLGLVALLCFSVYYFWHKNRHRKATPEYSMVGTQLNLRSICFAFLLLLSFTPLITMVQTPLYAGRNCQTKTQPPLSSAYKTNLNRTLEWMSSDAATSKGCNFTSIGNNNSAVYGLYDCHGDLVGYFCQFCVSIAAREVPQRCSNSVSAVVWYDACIIRYSNESFFGKVLAYPTWHHTFGTKNISNMAEIQQGEDFVKSLIRKATVETNQLYYMDGFNLSSTQRRYVTAKQQEDNMRSKILIISFSVMGSITLLCFSVYCFWYRSRPRKEYAMEGLFSVKSDVFSFGVLILEIICGKKNSGFYLSECGESLLLYVSFLSYLMIKA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1442 583 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 488 528 - -
Aed4g1442 583 ProSiteProfiles Gnk2-homologous domain profile. 133 238 IPR002902 -
Aed4g1442 583 Pfam Salt stress response/antifungal 326 420 IPR002902 -
Aed4g1442 583 Pfam Salt stress response/antifungal 151 235 IPR002902 -
Aed4g1442 583 Pfam Salt stress response/antifungal 40 130 IPR002902 -
Aed4g1442 583 Gene3D - 26 132 IPR038408 -
Aed4g1442 583 Gene3D - 137 238 IPR038408 -
Aed4g1442 583 Gene3D - 320 423 IPR038408 -
Aed4g1442 583 Gene3D Transferase(Phosphotransferase) domain 1 477 572 - -
Aed4g1442 583 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 488 528 - -
Aed4g1442 583 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 15 284 - -
Aed4g1442 583 SUPERFAMILY Protein kinase-like (PK-like) 528 556 IPR011009 -
Aed4g1442 583 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 528 573 - -
Aed4g1442 583 ProSiteProfiles Gnk2-homologous domain profile. 319 423 IPR002902 -
Aed4g1442 583 ProSiteProfiles Gnk2-homologous domain profile. 25 132 IPR002902 -
Aed4g1442 583 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 528 573 - -
Aed4g1442 583 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 306 486 - -
Aed4g1442 583 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 15 284 - -
Aed4g1442 583 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 306 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1442 Aed-Chr4 18944326 18955297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1442 528 573 Receptor kinase-like Gene Family AT4G05200 60.870 1.56e-09 58.9