Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1432 ATGTCTGAAGAAGAACCACTGAGAATTGTGGTGATCCAGTACTATGCATCAAGAGACTTCAACACAAGTGCCATCAAATTGGTCCTTCAGGGTTATTCACTTGGGCGTGGAGACAAGCTTACACTTCTTGTAGTTCTTCGCCATGCTAGTAGTCCAAGTAGGATTCCCTTCATTGCAACTGCAAGATTGCGTGGATTGTTTGAGACTGATCACAAAATTGTTGAGGAAGAGTCTGCCAAGAAGAAAGAAGAGCTCCACAATAATCCAAGCATAAGGGAAATCTCTGAGCAGTGTGCAGCTGACAAGATCCAGTTCCAAATAGAAGTTCTTCAAGGCAATTTTCCAGAGGTTGCTCTGGATGCTGCCAACCGTTTGGAGGCAACATCAGTGATACTTTCTAGACAGATGAAGAAATATAAGAAGGACTTCAAGCAGAGTCTCTCTTGTGCTTTGTTAATAATGAAACGCGACAACACTTTGCAACACTTGAGAGGACCAAGGGAAACACAGCTGAATGATAGAGGCAATGGCAATGGCAATGCAAATTTTGGAAGAAGTTCTAATGATAAATCTCCACCAAAAATACAGCAAGTGGCAAATGCAATTTTCTGCTCCAATTCCAGCTCTTCAATTCAAACTCTTACAAAGGTTGTGTTCCCCCAACCTCATTTTCAAATGAAACAATTCCCTCTTGATAATAGAGAACTAGACATGGCAAGAGGGTTTTGCCTATTACCCACTTCTGATATTCAAAAGATTAATCATACTGAATTGTGTCACATAGAGACACCAGTGGAACATAGCAACAACCATGAAGCATATCAAACAGTTGAACAATTTAAAAATTCTGTTTGCTCGGTTTGCAACAACAGAAGACCAAAATTTGAACCGCTGAAAGAATTCACATACGCGGAGCTGCATGAGGCCACGCAGGGTTTTTCCCCAAAGAACTATCTGTCAGAAGGTGGATTTGGTTCTGTCTACAAGGGAATGCTGCAAGGAGGACTCAAGATTGCTGTTAAGCAACACAAGTGTGCAAGCTTCCAAGGAGAGAAGGAATTCAAATCTGAGGTCAATGCACTCAGCAGAGCAATACATGAGAATGTGGTCATGCTGCGCGGATCTTGTTCAGAAGGAAACAATAGGCTTCTTGTGTATGAGTTTGTTTGCAATGGCTCACTTGACCAACATTTATCGCAACACTCACGTAAACCTCTTAGCTGGGCAGAAAGGATCAAAGTTGCTATTGGAGCTGCAAAAGGCTTATTGTTTTTGCATGAGAAAAATATAATACACAGAGATGTGAGACCTAGTAACATCCTTGTCACACATGACTATGAAGCAATGCTTGGAGATTTTGGTCTGGCTAGAACTGAACAATTGGACTCCTTATACTCCACAGATGTAGTTGGAACTATAGGGTATTTGGCACCAGAATATGCTGAAGCTGGAAAAATGTCAACCAAGACAGATGTGTATTCTTTTGGTGTGGTTCTTCTTCAGCTAATAACTGGAATGAGGACTGCAGACAAACGGCTTGGCGATAAAAGTCTTGTGGGATGGGCTAGGCCACTATTGAAAGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATAATCATGATTGCCATCAGCTTTTTTGGATGATTCGTCTAGCAGAAAAATGTCTCAGCAGGGATCCTCAGAGGCGATTATCAATGGATACAGTGGTAATTGCCTTAGCTCATATCCTAGAAGGCAACACATGCAGTGTTGTACTGAGAGACTGCTCTCCAGCACGGTCAGATTCATCCTATGACATGTCAGAATTACTTATATCAGACACCTCACAGGAATTAGAAGGTGAAGATGCAGCAAGCATCATCTATGCAGGATTTGCTCCAATTTGTTTAAGACTCCCACCATCTCCTCCATTAGGAAGCACTTCATCAAGTGCATCATCAAGCATGCTCACAGGGCTAAGTGAATCTCCTTTAGAAGATTTGCCCAATAATAGTGAGAATAATAAGGATAAAAAGCCAAATGATCAAGGTGCCATATTTTAA 2052 0.4142 MSEEEPLRIVVIQYYASRDFNTSAIKLVLQGYSLGRGDKLTLLVVLRHASSPSRIPFIATARLRGLFETDHKIVEEESAKKKEELHNNPSIREISEQCAADKIQFQIEVLQGNFPEVALDAANRLEATSVILSRQMKKYKKDFKQSLSCALLIMKRDNTLQHLRGPRETQLNDRGNGNGNANFGRSSNDKSPPKIQQVANAIFCSNSSSSIQTLTKVVFPQPHFQMKQFPLDNRELDMARGFCLLPTSDIQKINHTELCHIETPVEHSNNHEAYQTVEQFKNSVCSVCNNRRPKFEPLKEFTYAELHEATQGFSPKNYLSEGGFGSVYKGMLQGGLKIAVKQHKCASFQGEKEFKSEVNALSRAIHENVVMLRGSCSEGNNRLLVYEFVCNGSLDQHLSQHSRKPLSWAERIKVAIGAAKGLLFLHEKNIIHRDVRPSNILVTHDYEAMLGDFGLARTEQLDSLYSTDVVGTIGYLAPEYAEAGKMSTKTDVYSFGVVLLQLITGMRTADKRLGDKSLVGWARPLLKERNYPDLIDERMMDNHDCHQLFWMIRLAEKCLSRDPQRRLSMDTVVIALAHILEGNTCSVVLRDCSPARSDSSYDMSELLISDTSQELEGEDAASIIYAGFAPICLRLPPSPPLGSTSSSASSSMLTGLSESPLEDLPNNSENNKDKKPNDQGAIF 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1432 683 ProSitePatterns Tyrosine protein kinases specific active-site signature. 430 442 IPR008266 GO:0004672|GO:0006468
Aed4g1432 683 PANTHER OS01G0253100 PROTEIN 12 650 IPR045271 GO:0004714|GO:0006468
Aed4g1432 683 MobiDBLite consensus disorder prediction 162 193 - -
Aed4g1432 683 Coils Coil 122 142 - -
Aed4g1432 683 MobiDBLite consensus disorder prediction 640 666 - -
Aed4g1432 683 SUPERFAMILY Protein kinase-like (PK-like) 297 580 IPR011009 -
Aed4g1432 683 Gene3D Transferase(Phosphotransferase) domain 1 389 591 - -
Aed4g1432 683 MobiDBLite consensus disorder prediction 171 193 - -
Aed4g1432 683 MobiDBLite consensus disorder prediction 640 683 - -
Aed4g1432 683 Pfam Protein tyrosine and serine/threonine kinase 317 573 IPR001245 GO:0004672|GO:0006468
Aed4g1432 683 SMART tyrkin_6 313 576 IPR020635 GO:0004713|GO:0006468
Aed4g1432 683 Gene3D Phosphorylase Kinase; domain 1 271 388 - -
Aed4g1432 683 ProSiteProfiles Protein kinase domain profile. 313 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g1432 683 PANTHER TYROSINE KINASE FAMILY PROTEIN 12 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1432 Aed-Chr4 18829429 18835772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1432 301 590 Trihelix Transcription Factor Family AT5G38560 46.026 6.84e-80 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aed4g1432 PK_Tyr_Ser-Thr 2e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2847 1 23680219 23683610 Aed4g1432 4 18829429 18835772 PCT