Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1424 ATGTCTGTTCTGCATCAAGGGATATGGCCAGAGTCTCCAAGTTTCAGAGATGAGGGTATAGGGGAGATTCCTTCAAGATGGAAAGGAGTTTGCATGGAGGGTCATGATTTCAAGAAGTCCAATTGCAATAGAAAATTGATAGGTGCAAGATACTATAACATTCAAGCTACATCAGGTGACAACCAGACTCAGATAGAAGCAACCAAAGGCTCCCCAAGAGATTCTGTTGGACACGGGACTCACACGGCGTCGACAGCAGCCGGTGTTCATGTCCACAATGCTAGCTACTTTGGTTTAGCACAAGGAACAGCAAGAGGTGGTTCACCTTCTGCTAGGATTGCTGCTTACAAAACATGCTCAGATGAAGGATGCTCTGGTGCCACCATACTAAAGGCTATTGATGATGCTGTTAAGGATGGAGTGGACATAATCTCAATTTCCATTGGATTCAGTTCACTGTTCCAATCAGACTTTTTGAGTGATGCTATAGCCATTGGAGCATTTCATGCAGAACAAAAGGGGGTATTGGTGGTGTGTTCAGCTGGAAATGATGGTCCTGATCCTTTCACTGTTGTGAACACTGCACCATGGATATTTACTATTGCAGCTTCTAATATTGATAGGAACTTCCAATCAACTATTGGTACAGGCATTAACTTCTCAAACCTTACTCATTCAAAGATGTATCATCTTGTCTATGGAGAGCAAGTAGCTGCCAAATTCGCCCCTGCATCAGAAGCTAGGAACTGTATTCCTGGATCACTAGATTACAAAAAGGTTGCAGGCAACATTGTTGTTTGTGCTACTGATGATCTAACTGTTTCAAGAAGAATCAAGAAGCTAGTTGTACAAGATGCAAGAGCCATAGGGGTGATACTCATTAATGAGAACAGCAAAGATGCTCCCTTTGATGCAGGTGTATTTCCCTTCTCTCAGGTTGGCAATCTTGAAGGGCATCAGATACTACAATACATAAACTCTACCAAGAACCCAATTGCAACAATTCTTCCAACAACAGAAGTTGCAAGATATAAGCCTTCACCAATTCCGGATGTCATGGCTCCAGGAATCAGCGTTTTGGCCGCCGTGATTCCTAAAATCAAAGAGCCAGGAAGTGTTCCAGTTGGGAAAAAGCCATCCTTGTATGCCATAAAATCTGGTACATCTATGGCCTGCCCACATGCAACAGGTGCAGCAGCATTCATTAAATCAGTACACCCAAAATGGAGTTCTTCAATGATCAAATCAGCATTGATGACAACAGACTATCTAAGATTCCTTTGCAACTATGGCTATTCACAGAAAATCATAAGGTCAATGTCCAAGACTAACTTCAATTGCACAAAGAACTCGTCTCATGAAGACCTTATCTCAAACACCAACTACCCATCAATTTCTATAAGTACACTTAAGAGGGAACAAAAAGCAAAAGTGATCACAAGAACAGTTACCAATGTTGGATCCCTTAATGCAACATACACTGCAAAAGTGAGAGCTCCTGAGGGATTGGTTGTGAAGGTCATTCCCAATAAACTTGTGTTTTCTGAGGGTGTTCAAAGAGTGACCTATAAAGTCTCATTCTATGGAAACAAGGAGGCAAGGGCTGGATACAATTTTGGGTCTTTAACATGGCTTGATGGTCACCATTATGTTCATACCGTGTTTGCAGTCAAAGTTGAATAG 1683 0.4195 MSVLHQGIWPESPSFRDEGIGEIPSRWKGVCMEGHDFKKSNCNRKLIGARYYNIQATSGDNQTQIEATKGSPRDSVGHGTHTASTAAGVHVHNASYFGLAQGTARGGSPSARIAAYKTCSDEGCSGATILKAIDDAVKDGVDIISISIGFSSLFQSDFLSDAIAIGAFHAEQKGVLVVCSAGNDGPDPFTVVNTAPWIFTIAASNIDRNFQSTIGTGINFSNLTHSKMYHLVYGEQVAAKFAPASEARNCIPGSLDYKKVAGNIVVCATDDLTVSRRIKKLVVQDARAIGVILINENSKDAPFDAGVFPFSQVGNLEGHQILQYINSTKNPIATILPTTEVARYKPSPIPDVMAPGISVLAAVIPKIKEPGSVPVGKKPSLYAIKSGTSMACPHATGAAAFIKSVHPKWSSSMIKSALMTTDYLRFLCNYGYSQKIIRSMSKTNFNCTKNSSHEDLISNTNYPSISISTLKREQKAKVITRTVTNVGSLNATYTAKVRAPEGLVVKVIPNKLVFSEGVQRVTYKVSFYGNKEARAGYNFGSLTWLDGHHYVHTVFAVKVE 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1424 560 Pfam Subtilase family 57 422 IPR000209 GO:0006508|GO:0008236
Aed4g1424 560 Gene3D - 432 559 - -
Aed4g1424 560 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 421 557 IPR045051 -
Aed4g1424 560 MobiDBLite consensus disorder prediction 1 20 - -
Aed4g1424 560 PANTHER CUCUMISIN-LIKE 421 557 - -
Aed4g1424 560 SUPERFAMILY Subtilisin-like 6 421 IPR036852 GO:0004252|GO:0006508
Aed4g1424 560 PRINTS Subtilisin serine protease family (S8) signature 74 87 IPR015500 -
Aed4g1424 560 PRINTS Subtilisin serine protease family (S8) signature 386 402 IPR015500 -
Aed4g1424 560 ProSiteProfiles Serine proteases, subtilase domain profile. 1 443 - -
Aed4g1424 560 Pfam PA domain 243 309 IPR003137 -
Aed4g1424 560 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 421 IPR045051 -
Aed4g1424 560 MobiDBLite consensus disorder prediction 61 81 - -
Aed4g1424 560 Pfam Fibronectin type-III domain 460 557 IPR041469 -
Aed4g1424 560 Gene3D Peptidase S8/S53 domain 3 421 IPR036852 GO:0004252|GO:0006508
Aed4g1424 560 Gene3D - 207 342 - -
Aed4g1424 560 ProSitePatterns Serine proteases, subtilase family, serine active site. 387 397 IPR023828 -
Aed4g1424 560 CDD PA_subtilisin_like 213 335 - -
Aed4g1424 560 PANTHER CUCUMISIN-LIKE 2 421 - -
Aed4g1424 560 CDD Peptidases_S8_3 3 421 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1424 Aed-Chr4 18677651 18682056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1424 4 557 Subtilisin-like Serine Gene Family AT1G20150 39.280 2.24e-142 428