Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1414 ATGTCCTCCTCATTCAAAGCTTACGGCAAGGTCGACGAGGCGGAGCAAGCCATGCTGGAAGTCCGCCGCCACAAGACGCGGAAGCGAGTCACCATCATAGCCCTATCCACTGTGGTCCTCGTCGGAATTGTCTGTGCCGCTGTGTTCGGAACCACCGCTGCTCACAACAACAAAAACAACGACGGTGATGACGACAACAACAATAATGCACAATCATCATCGCCGTCGATTTCCAGTTCGGTGAAGGCGGTTTGCGACGTGACGCTCTACAAGGACGCGTGCTTTGGCAGCCTCGGCCCTCTTGCGCACTCATCAGGCCATCAGGTTCGGCCTGAGGATCTGTTCTTGATGTCTATTAAAGTGGCACTTGAAGAGGTTTCAAAAGCTGTTGAGCAATATTTCTCTGATGAGAAGGGTTTTTTCAAAGGCTTGAATGTTGAAAATAGGACCGTGGAAGGGTTTAAGAACTGCAAGGATCTTTTAGGTCTTGCTGTTGATCATCTGAATGATTCTTTGGCTTATGGGGGCAAGTCTTCCTTGCTTGATGTGTTGGAGGATCTCAGAACTTGGTTGAGTGCTGCAGGTACTTACCAGCAAACCTGCATTGATGGCTTTGGAGAGGCAGAAGAAGCACTGAAGACCAATGTACTCAACAATCTGAAAAACTCCAAAGAGTTCACAAGTAACAGTCTTGCCATTATTACTTGGCTCAACAAAGCTGCAAGCACAGTGAACCTGAGGCGCTTGTTGAGTACAAAAGAAGAAGAACCAAAGTGGCTTCATTCCAAAGACAGGAAAAAGCTGCTTCAAAAAGATGACCAATTGAAGAAGAAAGCTGACATTGTTGTAGCAAAAGATGGAAGTGGAAAGTACAAAACAATCACTTCTGCACTCAAACATGTCCCTGAGAAAAGTGACAAGAGGACTGTGATCTATGTCAAGAAGGGGGTTTACTTTGAAAATGTGAGGGTGGAGAAGACCAAATGGAATGTCATGATCATTGGTGATGGTATGAATGCCACAGTTGTATCTGGAAGTCTTAACTTTGTAGATGGCACCCCAACTTTTTCATCTGCAACATTTGGTATGCATGCAACACTTTTCATTTAG 1110 0.4559 MSSSFKAYGKVDEAEQAMLEVRRHKTRKRVTIIALSTVVLVGIVCAAVFGTTAAHNNKNNDGDDDNNNNAQSSSPSISSSVKAVCDVTLYKDACFGSLGPLAHSSGHQVRPEDLFLMSIKVALEEVSKAVEQYFSDEKGFFKGLNVENRTVEGFKNCKDLLGLAVDHLNDSLAYGGKSSLLDVLEDLRTWLSAAGTYQQTCIDGFGEAEEALKTNVLNNLKNSKEFTSNSLAIITWLNKAASTVNLRRLLSTKEEEPKWLHSKDRKKLLQKDDQLKKKADIVVAKDGSGKYKTITSALKHVPEKSDKRTVIYVKKGVYFENVRVEKTKWNVMIIGDGMNATVVSGSLNFVDGTPTFSSATFGMHATLFI 369
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1414 369 MobiDBLite consensus disorder prediction 56 77 - -
Aed4g1414 369 Gene3D - 275 369 IPR012334 -
Aed4g1414 369 Pfam Plant invertase/pectin methylesterase inhibitor 80 233 IPR006501 GO:0004857
Aed4g1414 369 TIGRFAM PME_inhib: pectinesterase inhibitor domain 76 237 IPR006501 GO:0004857
Aed4g1414 369 CDD PMEI-like_3 83 239 - -
Aed4g1414 369 PANTHER PECTINESTERASE 17 369 - -
Aed4g1414 369 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 237 IPR035513 -
Aed4g1414 369 SUPERFAMILY Pectin lyase-like 278 365 IPR011050 -
Aed4g1414 369 Gene3D Invertase/pectin methylesterase inhibitor family protein 78 239 IPR035513 -
Aed4g1414 369 Pfam Pectinesterase 280 369 IPR000070 GO:0030599|GO:0042545
Aed4g1414 369 PANTHER PECTINESTERASE 17 369 - -
Aed4g1414 369 SMART PMEI_2 76 233 IPR006501 GO:0004857
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aed4g1414 Aed-Chr4 18548025 18550844 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1414 7 369 Carbohydrate Esterase AT3G10710 49.333 1.63e-103 314
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2833 1 23536350 23539222 Aed4g1414 4 18548025 18550844 PCT