Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1412 ATGTCAACCCCACCAATGTCTCTTCTATTCATTTTTTTGTTCTCCCTCATGATTGTACCATCACTCTTAGCTGACCAAGCTCCATCACCATCTCCATCACATGCCCCTCATGCTCCTCCTCCTCCTATTTCTTCTCCACCACCACCACCTTCTCCAAATCACTCTCCTCCTCCTCCTCCTATTTTTTCTCCACCCCCACCATCTCAAAATCATGCATCTCCTCCTCCTCCTCCTTCTTCTCCACCACCACCATCTCCAACACCACCTCCAGCACGTGCCCCTTCTCCACCACCTCCTGCTCCACCTTCCTCACCCTCATCAGCATGCAAATCCACACTCTACCCAAAGCTATGCCGCTCCATCCTCTCGTCCATCCGCTCCTCCCCTTCCGACCCCTACCACCTAGGCAAATTCTCCATCAAACAAAGCCTCAAACAAGCCAAAAGACTCGCCAAAGTCTTCAAAGAGTTCCTCACAAAACACAAAAAATCATCTCCCTCTCTCAACCCCGCCGAGATCGCGGCCCTAGAGGACTGCAGCGAGCTCAACCAGCTCAGCATCGAATACTTGGAGTCAGTCTCGCAGGAGCTCAGCTCCCCAGACAACTCCTCAACCAACGTTGAGCTGGTCGAGAGGATCGAGACGTATCTCAGCGCGGTCGCCACCAACCACTACACTTGCTACGACGAGTTGGTGGCGATCAAGAGCGACATTGCCAATGCTATTGCCGTGCCTCTCAAGAATGCCACACAATTGTATAGTGTGTCACTTGGGTTGGTCACTCAGGCTCTGAAGAGAAACCTCAAGAAGCATAAGACTCGCAAACAGGGTCTTCCCACCAACGATTTCAAAGTCAGGCAGCCACTCAAAAAACTCATTAAGCTTCTTCACACAAAGTACAGTTGCACAGCATCATCCAATTGTAGTACTACTAGAACTGAAAGGATTCTTAAAGAAAGTGAGAGCAAAGGGGTTCTTCTGAAAGAGTTTGCAATTGTGAGCCCTGATGGCACAGAAAACTTCACCTCCATTGGAGAGGCTATTGCAGCTGCACCTGACAATTTAAGGCCAGAAGATGGCTATTTTCTTATCTATGCCAAGGAAGGAAACTATGAGGAATATGTCATTGTTCCCTTTCAAAAGAAGAATATCTTGCTAATTGGTGATGGCATCAACAAGACTTGCATCACTGGAAACCATAGTGTTGTAGATGGTTGGACCACTTTCAATTCTTCAACCTTTGCTGTCTCCGGAGAAAGATTTGTAGCAGTGGATGTAACATTCATTAACACAGCAGGCCCTCAGAAGCACCAAGCAGTGGCAGTGAGGAACAACGCAGACCTCTCCACATTCTACCGCTGCAGCTTCGAGGGTTACCAAGACACTCTCTATGTCCACTCCCTCAGGCAGTTTTACCGAGAATGTGACATCTACGGCACCATTGACTTCATCTTTGGCAACGCCGCGGTGGTGTTCCAGAGCTGCAACATCTACGCCAGAAAGCCGCTGCCAAACCAGAAGAATGCTGTCACGGCACAGGGCCGGACCGACCCCGACCAGAACACCGGAATTTCGATCCAGAATTGCAGGATCGACGCCGCACCGGACCTCGCCGGGGACTTGAATTCCACCAAGACTTACTTGGGAAGGCCGTGGAAAGTATATTCAAGGACAGTGATTATGCAGTCTTATGTCGGAGGACTGGTTCAGTCTGCTGGATGGTTGGAGTGGAATGGAACTGATGGGTTAAGCACACTGTTTTATGGCGAGTTTGATAACTTTGGACCTGGCTCTGATACAAGCCAAAGGGTGCAATGGGGTGGTCACACTCTGTTGAGTGCTGCTCAAGCTGGGAACTTTACTGTGTATAATTTTACCTTGGGGTATACATGGCTTCCGGATACTGATGTACCCTATTCTGAAGGGCTTAATTTAGATTAG 1941 0.4915 MSTPPMSLLFIFLFSLMIVPSLLADQAPSPSPSHAPHAPPPPISSPPPPPSPNHSPPPPPIFSPPPPSQNHASPPPPPSSPPPPSPTPPPARAPSPPPPAPPSSPSSACKSTLYPKLCRSILSSIRSSPSDPYHLGKFSIKQSLKQAKRLAKVFKEFLTKHKKSSPSLNPAEIAALEDCSELNQLSIEYLESVSQELSSPDNSSTNVELVERIETYLSAVATNHYTCYDELVAIKSDIANAIAVPLKNATQLYSVSLGLVTQALKRNLKKHKTRKQGLPTNDFKVRQPLKKLIKLLHTKYSCTASSNCSTTRTERILKESESKGVLLKEFAIVSPDGTENFTSIGEAIAAAPDNLRPEDGYFLIYAKEGNYEEYVIVPFQKKNILLIGDGINKTCITGNHSVVDGWTTFNSSTFAVSGERFVAVDVTFINTAGPQKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAVVFQSCNIYARKPLPNQKNAVTAQGRTDPDQNTGISIQNCRIDAAPDLAGDLNSTKTYLGRPWKVYSRTVIMQSYVGGLVQSAGWLEWNGTDGLSTLFYGEFDNFGPGSDTSQRVQWGGHTLLSAAQAGNFTVYNFTLGYTWLPDTDVPYSEGLNLD 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1412 646 Pfam Pectinesterase 331 626 IPR000070 GO:0030599|GO:0042545
Aed4g1412 646 Gene3D - 330 645 IPR012334 -
Aed4g1412 646 PANTHER PECTINESTERASE 99 643 - -
Aed4g1412 646 SUPERFAMILY Pectin lyase-like 330 642 IPR011050 -
Aed4g1412 646 ProSitePatterns Pectinesterase signature 2. 477 486 IPR033131 -
Aed4g1412 646 Gene3D Invertase/pectin methylesterase inhibitor family protein 106 263 IPR035513 -
Aed4g1412 646 CDD PMEI-like_3 109 261 - -
Aed4g1412 646 PANTHER PECTINESTERASE 99 643 - -
Aed4g1412 646 MobiDBLite consensus disorder prediction 32 105 - -
Aed4g1412 646 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 107 262 IPR035513 -
Aed4g1412 646 TIGRFAM PME_inhib: pectinesterase inhibitor domain 106 262 IPR006501 GO:0004857
Aed4g1412 646 Pfam Plant invertase/pectin methylesterase inhibitor 106 258 IPR006501 GO:0004857
Aed4g1412 646 MobiDBLite consensus disorder prediction 24 110 - -
Aed4g1412 646 SMART PMEI_2 100 259 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1412 Aed-Chr4 18530336 18535189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1412 73 643 Carbohydrate Esterase AT3G10720 58.744 0.0 687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2832 1 23530247 23535898 Aed4g1412 4 18530336 18535189 PCT