Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1393 ATGGCCGGAAACTGCTTGCCGCCGGTGAACCTCACCGGCAGCGGCCGCCCGGTGCTCGAACCCAACGAAATCGAGTGTTTCTTCCTCTCCGGCGTTGACCTTCTCTGCGAAGACGACCCAACCTTCCCTCATCTCAAATCCGGTCTTCTCATCCTCACAACACACCGCCTCCTCTGGCTCCCGGACTCCGCCTCCTTCGGCGGCGTTCCCGCCGGCGCCATCCCCCTCGCCGCCGTCTCCCACATTTTCTCCCCCAAGATGTCCATCCGGAAGGTTTTCGCCTCGCCGCGAGTCCGGTTCCAGGTGTCGCTGTCGCCGGAGGGCCGTGTCTCGGCGGCGGGGTCTCGATCGGTGGTGGCGACAGTGGTGGTGAGGGGCAAGGGGGACTGTGACGCGTTTCTGCCGAAGTTTATGGAGAATTGCCGCGCCAGGGCGTGGGAGCAGGCCGGGAGCGGGTCTGGATCGGTGTCGAATGCGGTGGCGGCGGCGACAACGACGGCGTCGTCGTCTTCGGGCGGGATTTATTCGACCGACGGGACAGTTAGGATGGTGGGAGTGTCGGGGATACTGAGGAAGGAGCAGGAAATGTGGGAGAGCACTGATAGAAGCTTGCAGGATGCTTTTCAGGATTTGAATGCTCTCATGAGCAAGGCTAAAGAGATGGTGTTGCTAGCGGAGAAAATGAGGCAAAAACTTTTGTCTGGCTCAAATTCTCAAACCAATGCAACTAATGATGAGGAGATGGGTTCAAAGGAAGAGATGCAAGATTGGTTATTGAGTGTTGGTATTATATCCCCTGTTACCAAAGAGTCTGCGGGTGCTTTGTATCATCAGCAACTTTCTCGTCAGTTGGCAGATTTTGTTAAAGTTCCACTTGAGAAAGCTGGGGGAATTATCAATCTTATTGATATATATTGTCTCTTCAATCGAGCACGTGGCACAGAATTGATCTCACCTGATGATTTGTTGCAAGCATGTTCTCTGTGGGAGAAGTTTGATCCCAGTGGTTTTGCGAAAGTTTTCAATAAAATCAAGATGCTTGTTATGAAACCTGAAGCCCTTCAAGCTGGGATAAGTGCTAGTGATGCTTCAAGGACACTAGGGGTTGCCCCAACAATGGCAAAGGAGCATCTCTTGTCTGCTGAGAGCAAAGGTTTACTATGCAGAGATATAAGCCCTGATGGATTTCGCTTTTATATTAACTTAGTGAAAGATCAGGGAACCTATGCCTCGTGGGTACTGGCTAACCATACTCAAGCTTAA 1263 0.5249 MAGNCLPPVNLTGSGRPVLEPNEIECFFLSGVDLLCEDDPTFPHLKSGLLILTTHRLLWLPDSASFGGVPAGAIPLAAVSHIFSPKMSIRKVFASPRVRFQVSLSPEGRVSAAGSRSVVATVVVRGKGDCDAFLPKFMENCRARAWEQAGSGSGSVSNAVAAATTTASSSSGGIYSTDGTVRMVGVSGILRKEQEMWESTDRSLQDAFQDLNALMSKAKEMVLLAEKMRQKLLSGSNSQTNATNDEEMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLEKAGGIINLIDIYCLFNRARGTELISPDDLLQACSLWEKFDPSGFAKVFNKIKMLVMKPEALQAGISASDASRTLGVAPTMAKEHLLSAESKGLLCRDISPDGFRFYINLVKDQGTYASWVLANHTQA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1393 420 Pfam Vacuolar protein sorting protein 36 Vps36 11 102 IPR021648 GO:0032266|GO:0043130
Aed4g1393 420 Gene3D - 199 272 - -
Aed4g1393 420 SUPERFAMILY PH domain-like 5 123 - -
Aed4g1393 420 Pfam EAP30/Vps36 family 184 390 IPR040608 -
Aed4g1393 420 Gene3D - 10 151 IPR011993 -
Aed4g1393 420 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 7 409 IPR037855 GO:0000814|GO:0032509|GO:0043130
Aed4g1393 420 SUPERFAMILY "Winged helix" DNA-binding domain 266 336 IPR036390 -
Aed4g1393 420 ProSiteProfiles GLUE domain profile. 9 153 IPR021648 GO:0032266|GO:0043130
Aed4g1393 420 Gene3D - 273 350 IPR036388 -
Aed4g1393 420 SUPERFAMILY "Winged helix" DNA-binding domain 312 404 IPR036390 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1393 4 18206397 18213338 Aed4g1393 4 18206397 18213338 ECH