Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1387 ATGGATGTTGAGGCAGTAGATGATGGAGAAAACAGTGATAGACCTGCTTTTGAAAATGTTGAAGCAGAAAAAGGCCGGGAACAAAACATGGCTGAAAGAGAAGTAAATAATCAGAATGGTGATGCATATAGGAAACCACAAGTGGGCATGCTGTTTGAATCTGAAGATGCTGCAAAATCATTTTTTGATGCATATGCAAGACATGTAGGATTTAGCACACATGTTGGTCAATTCAGTCGTGCTAATCCTGATGGTCCAATTATAACTTGGGACTTTGCTTGTTCCAGGGAGGTATTTAAAAGGAAGAACATAGTTAGTTGCAATGCAATGCTTAGGGTAGAGAGAAAAGATGCAAACTGGATAGTGACAAAATTTGTTGAGGACCATAACCATTCCCTTGCTTCCTCTAGAAAGGAGCAGAACCTTCAACCCAGTAGGCATTCTGTAGGTTCTGCAAGGAATGTTACAGAGACATTTGATGCCCGCAATGAATCCTATGTTTCCTTGAATGGCAATCATTTAGAACCAATTATTTCAGTTCGGAGCTCCTCTCCAGCAGAAAAATGTCATCCAGTGAGAAACATTGAGGCTCTTGCCCATGCAAGATCTTCTCGAAAGAGGACCCTTGGAAGAGATGCTCAAAATCTTCTGAATTATTTTAAGAAGATGCAGGGAGAAAACCCTGGCTTCTATTATGCAATACAGCTAGATGATGAGAATCGCATGACCAATGTATTCTGGGCTGATGCAAGGTCAAGAACAGCATATAATTACTTTGGTGATGCTGTAATTTTTGACACCATGTATAGACCAAATCAATACCAAGTCCCATTTGCACCATTTACAGGATTCAATCACCATGGCCAAATGGTTTTATTTGGCTGTGCATTACTTCTAGATGAATCTGAGTCCTCCTTTACATGGCTATTCAAGACGTGGCTATCTGCTATGAATGATCGACCACCTGTTTCCATAACCACAGACCAAGATAGAGCCATACAAGCAGCTGTTGCTCATGTGTTTCCAGAAACTTGCCACTGTATTTGTAAGTGGCACATTTTGAGAGAAGGTCAAGAAAGATTGGCTCATCTTTACCTTGCTCATCCTTCATTCTATGGGGATCTATATAGCTGTATCAATTTTTCTGAGACTACAGAGGATTTTGAAGCAACATGGAAGTCTCTTCTGGATAAATATGATCTCCAGAAAAATGATTGGCTTCAAGCAGTGTATAATGCTCGCAAACAATGGGCCCCTGTATACTTTCATGATACTTTCTTTGCTGCAATTACTTCGAACCATGGGGTTAGCTCCTTTTTTGATGGCTATGTAAATCAACAGACAACCATACCTTTATTCTTTAGGCAGTATGAAAGATCTCTTGAACATTCATTGGACAAAGAAATAGAAGCAGATTATGAGACTATTTGTAACACACCTTTACTGAAGACTCCATCACCAATGGAACAACAGGCAGCAAATATGTACACTAAGAAGATTTTTGCAAAATTTCAAGAGGAACTGGTGGAAACATTTGCTTATACTGCAAATAATGTTGAGGATGATGGTGTGATCAGTAAATACAGGGTTGCAAAATATGAACATGAACACAAGGCATACATGGTCACATTAAATATCTCTGAAATGAAGGTGAGTTGCAGCTGTCAGATGTTTGAATACTCAGGTGTTCTTTGTCGACATATATTGACTGTCTTCACTGTTACAAATGTTCTTACCCTTCCATCGCACTACATTTTGAAGCGATGGACAAGGAATGCAAAATCTGGTATTGGAACTGATGAAAAGATAACAGATCCACTTGACATTGAAAATCTCACTGTACGTTTTAATACTTTATGTCGAGAAGCCATTAAGCTTGCTGAAGAAGGGGCAATTGCTGTAGAGACTTATAATGCAACAATGAATGCTTTAAGAGAGACTTCTAAAAGGGTAGGTATTATGAAGAAAAATGTTGCAAAAGTCACACTTCCAAAGACTCAGGGTAATGGAAGCTGCCTGGAAGACAATAGTAAGAAGAGCCCTTCATCAATTTCTGATGTCATCCCAGCATTATGGCCTTGGCAAGATTCAGTGTCACATCACTTCAATCTTAATGACCTTGGGCTTCCTGTTACTGATCTGAATACCCCTAGTATGGCTCCTGTTTCTATTCACCGGGATTGTGGCCCTCCAGATAACACTGTTGTCCTTACTTGTTTCAAGTCCATGACTTGGATCATCGAAAATAAGAATTCAAGCTCATCGAGTAAAATTGCAGTCATCAAGATGAAGCTTCAAGATTATGGTAAGGGCCCTTTAGGAGAGACAGAAGTGCAATTCAGGGTGACAAGGGTCACTTTGGAGCCTATGTTGAGGTCTATGACTTACATCAGTCAACAGCTAAATGCACCAGTCAATAAAGTTGCTATTATCAATCTGAGGCTCCAGGATACAAAGACAACTACTGGGCAAACAGAGGTGAAATTCCAAGTTTCTAGGGATACGCTAGGTTCCATGTTGAGATCTATGGCCTATATCCAGGAGCAGCTATAA 2553 0.3984 MDVEAVDDGENSDRPAFENVEAEKGREQNMAEREVNNQNGDAYRKPQVGMLFESEDAAKSFFDAYARHVGFSTHVGQFSRANPDGPIITWDFACSREVFKRKNIVSCNAMLRVERKDANWIVTKFVEDHNHSLASSRKEQNLQPSRHSVGSARNVTETFDARNESYVSLNGNHLEPIISVRSSSPAEKCHPVRNIEALAHARSSRKRTLGRDAQNLLNYFKKMQGENPGFYYAIQLDDENRMTNVFWADARSRTAYNYFGDAVIFDTMYRPNQYQVPFAPFTGFNHHGQMVLFGCALLLDESESSFTWLFKTWLSAMNDRPPVSITTDQDRAIQAAVAHVFPETCHCICKWHILREGQERLAHLYLAHPSFYGDLYSCINFSETTEDFEATWKSLLDKYDLQKNDWLQAVYNARKQWAPVYFHDTFFAAITSNHGVSSFFDGYVNQQTTIPLFFRQYERSLEHSLDKEIEADYETICNTPLLKTPSPMEQQAANMYTKKIFAKFQEELVETFAYTANNVEDDGVISKYRVAKYEHEHKAYMVTLNISEMKVSCSCQMFEYSGVLCRHILTVFTVTNVLTLPSHYILKRWTRNAKSGIGTDEKITDPLDIENLTVRFNTLCREAIKLAEEGAIAVETYNATMNALRETSKRVGIMKKNVAKVTLPKTQGNGSCLEDNSKKSPSSISDVIPALWPWQDSVSHHFNLNDLGLPVTDLNTPSMAPVSIHRDCGPPDNTVVLTCFKSMTWIIENKNSSSSSKIAVIKMKLQDYGKGPLGETEVQFRVTRVTLEPMLRSMTYISQQLNAPVNKVAIINLRLQDTKTTTGQTEVKFQVSRDTLGSMLRSMAYIQEQL 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1387 850 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 32 794 - -
Aed4g1387 850 ProSiteProfiles Zinc finger SWIM-type profile. 540 576 IPR007527 GO:0008270
Aed4g1387 850 Pfam SWIM zinc finger 542 574 IPR007527 GO:0008270
Aed4g1387 850 MobiDBLite consensus disorder prediction 1 42 - -
Aed4g1387 850 MobiDBLite consensus disorder prediction 8 31 - -
Aed4g1387 850 Pfam MULE transposase domain 263 355 IPR018289 -
Aed4g1387 850 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 794 IPR031052 GO:0006355
Aed4g1387 850 SMART 26again6 551 578 IPR006564 GO:0008270
Aed4g1387 850 Pfam FAR1 DNA-binding domain 60 134 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1387 Aed-Chr4 18097684 18105503 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aed4g1387 MULE 3e-26 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2831 1 23504855 23511358 Aed4g1387 4 18097684 18105503 PCT