Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1372 ATGGTTCCATCAATGCAACCGACTATCTTTATCTCTCCATTGCACTCACTCTCAGTCACACCCATCGGAGCCTCAGCCACCACTAGTTACACAAGGAATGATGCTTTACCTTACTTCCTTGCTCTTCTAATTTTTGACTCTCCCGCGTCGTGCTATCATCTTGCCAAAACCCTGCAGCAGCAGCCGCCGCCGCCGCCGCCGCCGTCCTCTCTTTCTAGTCTTCTGAATAAAAGCGTAACATTGCACCGAAAGCGCCGTCAGGTTTTCAGATTCAAATGTAGTTTTAAACCCTCAAAACCCACGAGCTGCTTCGACCTTCGCTGCTGTTTCTGGACTTCGACGGCGAGTGCGACACCGGCGGCCACTTCAACGCCGGCAGAAACATCACCGGCGCAGGTGTTTGGCTCCGACATCCCGACTCTGTTTTTGGTTTCACCACTGACCGGTGTGTTTGATGCTCTGTTTTTTTTTTTGTTTTTCCTTCCTCGGGCTATTGTCTTCTCCGTTGGCTGCCATCTCCGGCCACTGCAATTGATTTCTGTTCTGTTCCCACTTTTGCTTCTAGGTGATAAGGAATTTATCCATTTGAGTTGGACAGCTCTACTATTCTTTACCATGGTTACTGATGGAATCAAAAAACCTCAAGTTTCAGTTCCTACACCACCACCACCACCTCGAAAAATCAATGTGCAGAAATATGCTGAATCCCGTGCTCTCGAGCTCCAGAGTCTTCAATCTATCATAGAAAATAGAGTAAACAGTGATTATAGGTCACAAAGGAACAAGAGAAGAAGGACAACTGCATTTGATAACCAAATTGCAAGAAAGGGGTGCAGAAGAAAGAGACAGAAACTGGGAATAATTAACAAAGCCCTTGCTGAATCAGGTTTGGAGAAGGATCAACTAAAGAAGCTTCCTCGGCGTGTTCGTCGGAGATTTGAACTAAAGAAAAACCCAGAGAATGGTTTTTGCACTTCTGGGGATGGAACCAAGAGGCTGAGAACTCATGTTTGGCATGCAAAGCGGTTTGCTATGGCCAAGCTTTGGGGTTACCACCTTCCTATGTGTCTTCAAGGAAGGGGTAAAGGTTCGAGGGCACTCTTGAAAAGGCTCAAACAAGGGGTGCTTGTACATGATGCAAGCTATTGTACTGCTATCCAATTGGAGGGTCCAGAGGATTCATTGATGTCAGTATTAAGAATGGTACTGGAACCCTCTCCAGCAACAGCGACAGATCCTGGAAATCATGATGACTCTGTTCTTTCCAGTGTAACCTATGGAAGTGCAATGCTGCATCAATGTGGAGGACCAGTTTCTGTGCCAATTGCTCCTATAACCTACATGTGGCAGCCAAGTTCCCAACAAAATATGAGTACAGGGCTAGATGGAAGAAATCATTATACTTCTTTTGGACAACATGATATTGGCAATGATTCAAACAAACATGATGTTGAATTATGTGAAAAATCAGGCAAAATGAAGCATGGTTCTTCATTTAGACACCTTTGGGTTTGGATACATGCTTCTGCCTTTGAAGAAGGATATGATACTCTAAAAATTGCCTGCCAGAAAGAGATGGAGAAGAGTGGCATCTCAATTAATTGCTTTTCCCTTGAGGGTCAACTTGCAAAATTAGAATTAATTGGACTAGGGACATTTCAACTACTTCAAAAGATATTACATCCTGCTGGAAGTATTTCAGAGAATTATTGGCAATTAAAGAAGCATGTGACTATTGAAGAAGAATCTGTTTCTCAGAATAGAAATTCATCCATACTGAAAAATGAGGATTGTTTTTCTTCTTGGGCTATGTTATCTCTTAATGTCAAGGATCCTCGGGAGTTTCCAGTGGATTCCATTTCAACTAAGACTTCAAGTGATGCACAAGAAACTAAATACAAAGAGCTTGCTGAATTGGGAGGAATATTGGAAGAGAATAAAGATTTATCTTCATTATCATTGTCAAAACTTGAAGACAGCCAGTCTGATATTGACGATCTATGGTATGCTAGCACCAGAGGGTTGAGGCCCCCAGTGGAAGACAGTGTCCTTTCCAAGGAGAAACACCATGAACGTATGGTTAATTTCTGCCTTGATGATATAGATTCTGGAGAGGCCAACTCTTCAACTAAGGTGCAGTGCTCAAGATCTTGCCCTCTTCTTCTTTTAAAAAATGATATGAAGGAATTGATTAAAGGGTGGTCTGTTATACTTCCATTAAGTTGGGTCAAAGCCTTCTGGATTCCGCTCATCTCTAGTGGGGCACATGCAATAGGTTTGCAAGAGAAGCACTGGATTGCATGTGAAATGGGGCTACCATTTTTCCCTTCAGATTTCCCAGATTGTGAGGCATACTCTTCCTTCATGGAAACTAAAGCTGATGCATTTAATCAAAAAGAAGAATTCCGTCCTCCTTCGATAAGGCATTTGAGAGTTCCCATTCTGCCACCATGGGGTATTGTTCACATTACTTTCGACAAAGTGATTAATGCAATGGGGACTCCTGATCTTCCAACTAGGGAAGATTTGACCAATTCATTACCAAACCCTTGCCCTGGAAACTTTGAAATTTCAAATTCTGACTCTGGGAGTAATTTGTTTGATGGAACTGTAGTGAGGACAGGTTGTATGCTGACTACTTTCCTCAATGAAACAAAAACTGGTCAACTGTTATTGTTTCCTTCTGCAGCAGATGGAAAGGCTAGAATCTCTAAGTTTATTAACGGTGAACTAAAGCTTGATCCAAGGCATAGAAGCTTCAATATTTATGACCATAAGCTATGTTTTTTAAGAGTTCATCTTCATCCATTCAAGGAAGGATGTTTTGAAGAGGGTGCAGTGATTTGTGCACCATATCCTTCTGATATATCTTTATGGACTTCAAGTTATGAGAATAGAGAAGAGGGACTTCAAATGTCTCAATCTGCTATGCGATTGTACTTCAAGGAACATTCCTCTGGGAAATGGGGAATGCAGATACCAGATGATTCAATTGCGAGCAAGTCTCACCGGTGGCCTATTGGCTTTGTCACAACAGCTTCTGTTCAAGGAAGCAAGAGTCTAGTAGCAGAGGGCTTTTGCGAGGCTGTTTTACTATCTCATTTGAGAGAGGAACAGTGGAAGGAGTTGCCTATGAAGAAGAGGAGGGAAATATATTTACTTGTCAGGAATTTAAGATCTACAGCATATAGACTTGCTCTTGCCTCCATTGTTCTTGAATATCAGGAAAATGACATCGAGTTCTTGTAG 3249 0.4226 MVPSMQPTIFISPLHSLSVTPIGASATTSYTRNDALPYFLALLIFDSPASCYHLAKTLQQQPPPPPPPSSLSSLLNKSVTLHRKRRQVFRFKCSFKPSKPTSCFDLRCCFWTSTASATPAATSTPAETSPAQVFGSDIPTLFLVSPLTGVFDALFFFLFFLPRAIVFSVGCHLRPLQLISVLFPLLLLGDKEFIHLSWTALLFFTMVTDGIKKPQVSVPTPPPPPRKINVQKYAESRALELQSLQSIIENRVNSDYRSQRNKRRRTTAFDNQIARKGCRRKRQKLGIINKALAESGLEKDQLKKLPRRVRRRFELKKNPENGFCTSGDGTKRLRTHVWHAKRFAMAKLWGYHLPMCLQGRGKGSRALLKRLKQGVLVHDASYCTAIQLEGPEDSLMSVLRMVLEPSPATATDPGNHDDSVLSSVTYGSAMLHQCGGPVSVPIAPITYMWQPSSQQNMSTGLDGRNHYTSFGQHDIGNDSNKHDVELCEKSGKMKHGSSFRHLWVWIHASAFEEGYDTLKIACQKEMEKSGISINCFSLEGQLAKLELIGLGTFQLLQKILHPAGSISENYWQLKKHVTIEEESVSQNRNSSILKNEDCFSSWAMLSLNVKDPREFPVDSISTKTSSDAQETKYKELAELGGILEENKDLSSLSLSKLEDSQSDIDDLWYASTRGLRPPVEDSVLSKEKHHERMVNFCLDDIDSGEANSSTKVQCSRSCPLLLLKNDMKELIKGWSVILPLSWVKAFWIPLISSGAHAIGLQEKHWIACEMGLPFFPSDFPDCEAYSSFMETKADAFNQKEEFRPPSIRHLRVPILPPWGIVHITFDKVINAMGTPDLPTREDLTNSLPNPCPGNFEISNSDSGSNLFDGTVVRTGCMLTTFLNETKTGQLLLFPSAADGKARISKFINGELKLDPRHRSFNIYDHKLCFLRVHLHPFKEGCFEEGAVICAPYPSDISLWTSSYENREEGLQMSQSAMRLYFKEHSSGKWGMQIPDDSIASKSHRWPIGFVTTASVQGSKSLVAEGFCEAVLLSHLREEQWKELPMKKRREIYLLVRNLRSTAYRLALASIVLEYQENDIEFL 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1372 1082 Pfam POPLD (NUC188) domain 733 808 IPR012590 -
Aed4g1372 1082 Pfam Ribonucleases P/MRP protein subunit POP1 259 390 IPR009723 -
Aed4g1372 1082 ProSitePatterns Neurotransmitter-gated ion-channels signature. 768 782 IPR018000 -
Aed4g1372 1082 PANTHER RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 221 1070 - -
Aed4g1372 1082 PANTHER RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 221 1070 IPR039182 GO:0000172|GO:0001682|GO:0005655