Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1369 ATGAACGCACCCATCATTGACCCGTTACAGGGAGATTTTCCAGAAGTGATAGAGGAGTATTTGGAACATGGCTGTATGAAATGTATTGCTTTCAATCGTCGTGGCACTCTTCTTGCTGCTGGGAGCAATGACGGAAGTTGTGTTATCTGGGATTTTGAAACCCGGGGCATTGCTAAAGAGCTACGAGATAATGAATGCTCATCCCCAATAACTAGTGTCTGTTGGTCAAAGTGTGGCAATCGAATTCTTGTATCTGCTGCTGACAAGTCATTGTCACTGTGGGATGTTATGAGTGGCAAGAGGATTACAAGAATAGTTTTACAACAAACCCCTCTGCAAGCTCGTCTTCATCCGGGTTCCTCTAAACCATCTCTTTGCTTGGCATGCCCTCTCTCGTGTGCTCCAATGATTGTTGACTTGAACACAGGAAACACAACTTCGCTTAAAGTCTCTATCTCAGAGATATCCAACAATGGACCAACCCCTGCCTCGCGTAACAAGTGCACTGATGGAGTTACCTCCTTCTCGCCAACTGCTGCATGTTTTAGTAAGAATGGAAACCTGGTTTACGTGGGAAACTCTAAAGGGGAGATTCTTGTGATTAACTATGTGGATAGCGAGGTGCGTGCCATGGTTCCTATCCCCAGTGGTGCTGTAGTGAAGAACATCGTGTTTAGCCGGAATGGACAGTATCTTCTTACAAACTCGAATGATCGAATCATCAGGATCTATGAAAATCTTCTACAACAGAAAGATGAAGTTAGAGCACTCGATGAACTAAATGGGAACCTCGATAATCTAAATGGTGTTGAGAAGTTGAAAGCTGTAGGATCAAAATGCCTAGCATTGTTCCGGGAGTTTCAAGATTCGATCACGAAGGTGCACTGGAAAGCACCCTGCTTCAGCGGTGATGGCGAGTGGGTTGTGGGTGGTTCTGCTAGCAAAGGAGAGCACAAGATTTACATATGGGATAGAGTCGGGCATCTTGTGAAGATCCTTGAAGGACCTAAGGAAGCCCTTATTGATTTAGCATGGCATCCTGTGCGTCCTATTGTTGTATCTGTTTCTTTGAATGGCATAGTGTATATCTGGGCTAAAGATTACACCGAGAACTGGAGCGCATTTGCTCCGGATTTCAAAGAGCTTGAGGAAAACGAGGAGTATGTGGAGCGAGAAGACGAGTTTGATTTGATTCCTGAGACTGAAAAGGTGAAAGGATCCGATGTTCATGAAGATGATGAAGTTGACATTGTAACAGTCGAGAAAGATCCTGCTTTCAGCAACTCTGATATGTCTGATGAAGAGTTATGCTTCCTGCCAGCAACTCCCAGTTATGATGCTCCTGAACAGCCAGACAAGTTCATAGAAAGTTCTTCAAAGTTGGCGGACAGCAATAACTCTGGATCCCCTATTTCAGAAGAAGCTGGACCAAATGAACATACCATGAATCATAACTCAAGTCCAGTTGAAGATGATGCTGCCGGGGGAACACGAACTAAAAGAAAGCGGAAACCTTCAGAGAAGGTGTTGGAGTTGCAGGCAGAGAAAATGAAGAAACCCTCAAAATCTAGCAAGTCATCAAAATCCAAAAGTAAACATTTGGCCGATGAGGATGATGGTAATGGTTTTTATGGTGGTGAACTTTCTGATGAATAA 1656 0.4402 MNAPIIDPLQGDFPEVIEEYLEHGCMKCIAFNRRGTLLAAGSNDGSCVIWDFETRGIAKELRDNECSSPITSVCWSKCGNRILVSAADKSLSLWDVMSGKRITRIVLQQTPLQARLHPGSSKPSLCLACPLSCAPMIVDLNTGNTTSLKVSISEISNNGPTPASRNKCTDGVTSFSPTAACFSKNGNLVYVGNSKGEILVINYVDSEVRAMVPIPSGAVVKNIVFSRNGQYLLTNSNDRIIRIYENLLQQKDEVRALDELNGNLDNLNGVEKLKAVGSKCLALFREFQDSITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRVGHLVKILEGPKEALIDLAWHPVRPIVVSVSLNGIVYIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLIPETEKVKGSDVHEDDEVDIVTVEKDPAFSNSDMSDEELCFLPATPSYDAPEQPDKFIESSSKLADSNNSGSPISEEAGPNEHTMNHNSSPVEDDAAGGTRTKRKRKPSEKVLELQAEKMKKPSKSSKSSKSKSKHLADEDDGNGFYGGELSDE 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1369 551 SUPERFAMILY WD40 repeat-like 23 364 IPR036322 GO:0005515
Aed4g1369 551 MobiDBLite consensus disorder prediction 494 522 - -
Aed4g1369 551 ProSiteProfiles Trp-Asp (WD) repeats profile. 26 60 IPR001680 GO:0005515
Aed4g1369 551 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 104 IPR001680 GO:0005515
Aed4g1369 551 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 1 532 IPR037850 GO:0048188
Aed4g1369 551 Gene3D - 15 129 IPR015943 GO:0005515
Aed4g1369 551 Pfam WD domain, G-beta repeat 280 324 IPR001680 GO:0005515
Aed4g1369 551 Pfam WD domain, G-beta repeat 68 95 IPR001680 GO:0005515
Aed4g1369 551 Pfam WD domain, G-beta repeat 22 51 IPR001680 GO:0005515
Aed4g1369 551 Gene3D - 137 435 IPR015943 GO:0005515
Aed4g1369 551 SMART WD40_4 326 365 IPR001680 GO:0005515
Aed4g1369 551 SMART WD40_4 13 51 IPR001680 GO:0005515
Aed4g1369 551 SMART WD40_4 54 95 IPR001680 GO:0005515
Aed4g1369 551 SMART WD40_4 277 324 IPR001680 GO:0005515
Aed4g1369 551 SMART WD40_4 161 202 IPR001680 GO:0005515
Aed4g1369 551 SMART WD40_4 205 245 IPR001680 GO:0005515
Aed4g1369 551 MobiDBLite consensus disorder prediction 458 492 - -
Aed4g1369 551 MobiDBLite consensus disorder prediction 458 551 - -
Aed4g1369 551 ProSitePatterns Trp-Asp (WD) repeats signature. 38 52 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1369 Aed-Chr4 17488362 17492858 Wgd