Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1323 ATGTTCTTCCACAACACAAACTCCTTAGCACACTTTCTACTCCTAACTACAACGGTAGTTGGCATTGCAATGGGGGATGATAATTCATCAAAGGACAAACAGGAATGCACTTTGCAATTGGCAGGTTTAGCAACATGTCTAACCTATGTTGGAGGCCAAGCACAAGCTCCAACCCCAGATTGCTGCAGTGGCCTCAAGCAAGTGCTCAAGAACAACAAAAAGTGTTTGTGTGTTATTGTCAAAGATCGCAATGACCCTGACCTGGGTGGCTTACAGATTAATGTCACTTTGGCTTTGAACCTCCCAACAGCTTGCAATTCCCCTGTGAATGTGTCCAAGTGCCCTGAGCTGCTGCACATGGATCCCAAATCACCAGAGGCTCAAGTTTTTTATCAATTGAAGAATGGCTCCAACAAAAATGGCACAAGTCCTGCACCAAGTCCTTCTGGTAATGAAATTCACATGAAACTTTGTTTTGTAATAAACTAA 489 0.4335 MFFHNTNSLAHFLLLTTTVVGIAMGDDNSSKDKQECTLQLAGLATCLTYVGGQAQAPTPDCCSGLKQVLKNNKKCLCVIVKDRNDPDLGGLQINVTLALNLPTACNSPVNVSKCPELLHMDPKSPEAQVFYQLKNGSNKNGTSPAPSPSGNEIHMKLCFVIN 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1323 162 Pfam Probable lipid transfer 26 114 IPR016140 -
Aed4g1323 162 CDD AAI_LTSS 43 106 - -
Aed4g1323 162 PANTHER PROTEIN YLS3 13 143 - -
Aed4g1323 162 SMART aai_6 36 114 IPR016140 -
Aed4g1323 162 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 13 143 IPR043325 -
Aed4g1323 162 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 34 115 IPR036312 -
Aed4g1323 162 Gene3D - 33 115 IPR036312 -
Aed4g1323 162 PRINTS Plant phospholipid transfer protein signature 35 51 IPR000528 GO:0006869|GO:0008289
Aed4g1323 162 PRINTS Plant phospholipid transfer protein signature 92 109 IPR000528 GO:0006869|GO:0008289
Aed4g1323 162 PRINTS Plant phospholipid transfer protein signature 56 70 IPR000528 GO:0006869|GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1323 Aed-Chr4 15942737 15943976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1323 27 151 Acyl Lipid Metabolism Gene Families AT2G44300 68.000 3.16e-58 179