Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1322 ATGAAGTACGTGTTGGTGACAGGTGGTGTTGTGAGTGGACTTGGGAAAGGAGTAACTGCAAGCAGTATTGGAGTGCTCCTTCAGGCTTGTGGCTTTCGGGTTACTTCTATCAAGATTGATCCCTATCTGAACACTGATGCAGGGACAATGTCTCCTTTTGAGCATGGAGAAGTGTTTGTTTTAGATGATGGCGGTGAGGTTGACCTTGATCTTGGAAACTATGAACGTTTCTTGGACCTCAAATTAACTCGTGACAATAATATCACAACTGGAAAAATATATCAGTCTGTTATTGAAAAGGAGAGAAAAGGAGATTATCTTGGCAAGACTGTGCAGGTTGTTCCACACATTACTGATGCCATTCAAGAATGGATAGAGCGTGTGGCACAGATACCAGTTGATGGAAAAGAAGACCCTGCTGATGTTTGTGTCATTGAGTTGGGTGGAACTATTGGGGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCCTGGCAACTTCTGTTTAATTCATGTCAGCCTGGTACCTGTTCTCAATGTTGTTGGTGAACAGAAAACAAAACCAACTCAGCACAGTGTCCGCCAACTTAGAGGGTTAGGGTTGACCCCAAATCTTCTAGCTTGTCGCAGTTCAAAGGAACTTGATGAGAACGTCAAGGAAAAACTTTCTCAATTTTGTCATGTTCCGTCATCAAGCATACTAACTCTCTACGATGTTCCAAATATTTGGCACATTCCTTTGCTATTAAGAGATCAGAAGGCGCATGAGGCAATCCTGAAAACATTAAACTTGCAAGGTGTTGCTACTGAACCTAATTTTAAGGAATGGATTGCAACAACAAAAGTATATGACAAATTTCATGAATCAGTTAGAATTGCAATGGTGGGAAAATATACTAACCTTTCAGATGCATATCTTTCTGTACTGAAGGCACTTTTGCATGCTTCAGTTGCTTGCAATCATAAGCTTGTTGTGGATTTGGTTCCCGCTGAACATCTTGAAGATGATACCTCTAAAGAGGATCCTGATGCTTATAAGGCTGCTTGGGGTCTTTTGAAGGGTGCTAATGGAATTCTAGTACCAGGAGGTTTTGGTGACAGAGGAGTGGAAGGAAAAATGGTTGCTGCCAAGTATGCACGAGAAAATAGCATTCCATTTCTTGGCATTTGCTTGGGGATGCAAATTGCTGTCATTGAGTTTTCAAGATCTGTTCTGGGTCTTCATGATGCTAATAGCACAGAATTTGATCCCAAAACCAAAAATCCTTGTGTCATATTTATGCCAGAAGGTTCAAAGACTCATATGGGGGGAACTATGCGTCTTGGTTCCAGGAGGACTTACTTTAATGCTGCTGACTGCAAATCGGCCAAGTTGTATGGTAATGCAAGCTTTGTTGATGAGCGACATCGGCATAGATACGAGGTTAATCCTGATATGATATCACAACTTGAGACTGCTGGTCTATCTTTTGTTGGCAAAGATGAATCTGGGAAGCGCATGGAGATAGTTGAATTTTCTCCCCATCCTTTCTTCATTGGTGCTCAGTTTCATCCTGAGTTCAAGTCGAGACCAGGGAAACCTTCTCCATTATTCTTAGGATTAATATCAGCAGCATGTGAGAGGACAGTTGTGCCTGCAAGCAAAGGGTGTGGCAAGTTAACAACAAATGGGATAGTACACTCAACAAATGGGATACACTCACATAATGGAAATGGGTTCAAATCTTCCAACAATAGTAGTTCCTTAAATGGTGTATATACAAGTACAACTACCAATGGGGTGGTGTGTGTTGATGGGAGGAGCTGTTTATCATAA 1839 0.4154 MKYVLVTGGVVSGLGKGVTASSIGVLLQACGFRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDLKLTRDNNITTGKIYQSVIEKERKGDYLGKTVQVVPHITDAIQEWIERVAQIPVDGKEDPADVCVIELGGTIGDIESMPFIEALGQFSYRVGPGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSSKELDENVKEKLSQFCHVPSSSILTLYDVPNIWHIPLLLRDQKAHEAILKTLNLQGVATEPNFKEWIATTKVYDKFHESVRIAMVGKYTNLSDAYLSVLKALLHASVACNHKLVVDLVPAEHLEDDTSKEDPDAYKAAWGLLKGANGILVPGGFGDRGVEGKMVAAKYARENSIPFLGICLGMQIAVIEFSRSVLGLHDANSTEFDPKTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFNAADCKSAKLYGNASFVDERHRHRYEVNPDMISQLETAGLSFVGKDESGKRMEIVEFSPHPFFIGAQFHPEFKSRPGKPSPLFLGLISAACERTVVPASKGCGKLTTNGIVHSTNGIHSHNGNGFKSSNNSSSLNGVYTSTTTNGVVCVDGRSCLS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1322 612 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Aed4g1322 612 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Aed4g1322 612 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Aed4g1322 612 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Aed4g1322 612 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Aed4g1322 612 PANTHER CTP SYNTHASE 1 573 - -
Aed4g1322 612 Gene3D - 1 292 IPR027417 -
Aed4g1322 612 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Aed4g1322 612 PANTHER CTP SYNTHASE 1 573 IPR004468 GO:0003883|GO:0006221
Aed4g1322 612 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Aed4g1322 612 Gene3D - 294 556 IPR029062 -
Aed4g1322 612 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Aed4g1322 612 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Aed4g1322 612 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1322 Aed-Chr4 15892057 15900903 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0128 1 2494001 2500589 Aed4g1322 4 15892057 15900903 PCT
Aed4g1322 4 15892057 15900903 Aed1g0205 1 3504821 3512464 PCT