Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1282 ATGGAAAGAATGTTCCCTCCTAAGATGAAGCCTTCAAGTATGATGATGAATTCCCATGATCAGAGGCCCATGTGTGACTCAGGGCTTGTCCTCACCACTGACCCAAAGCCACGCCTCCGTTGGACTGTTGAACTGCATGAACGCTTTGTTGATGCTGTTGCGCAGCTTGGAGGACCTGATAAGGCCACTCCTAAAACAATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCATCTCAAGAGCCACCTTCAGCTTCGGCTTTCGAACTTCAAAGGAATATTGGCACCTCTTCTGCCATGA 306 0.4869 MERMFPPKMKPSSMMMNSHDQRPMCDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQLRLSNFKGILAPLLP 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1282 101 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 86 IPR044848 GO:0003700
Aed4g1282 101 SUPERFAMILY Homeodomain-like 35 90 IPR009057 -
Aed4g1282 101 PANTHER MYB FAMILY TRANSCRIPTION FACTOR APL 4 86 - -
Aed4g1282 101 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 36 86 IPR006447 GO:0003677
Aed4g1282 101 Gene3D - 35 93 - -
Aed4g1282 101 Pfam Myb-like DNA-binding domain 39 86 IPR001005 -
Aed4g1282 101 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 93 IPR017930 -
Aed4g1282 101 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1282 Aed-Chr4 13925532 13929494 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aed4g1282 Myb_DNA-binding 1.7e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0252 1 4260143 4263119 Aed4g1282 4 13925532 13929494 PCT