Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1267 ATGAAGGTTTCAGCAGGTTCAAGTACAAAAATAGTGGGTGTATCTTTGAGGAAATCCTTCACGGGAAGAGTGCAAAAAAACACAAGGAAAGGTGATATTCAGTTAGATGCACTCAATAGAGATGTTCAGAAGAAGAATACAAATGGAGGCCAAACAGTTATTGCCACAAAGGACAGGTTTACAAGGAAGCCTATAGCTACAAGCACTTCAAGGAAGTCTTTACCAGTACCGAGGGTAAGCAGGGACGATATGAGTAACACAAAGGAAAATGTTAAAAGTTCTCAAACAGAAAAAGGCCTAAGTGGTCTCCCCACTAAGGCAACCACAAGCAGAAGAGATAGTTCCCAACTGATTAATGCAAGAAGCAATCTATGGAAGAATCGTGTGAGTGATGGTTTTGTTCCAATGGTCCAACCTAATGTTTTACTTGCATCCTCAAGGAACTCCACTAAGCCTATTGTTAAGACCATACTCGAGGCTTCTACTGCTCAAAGGACTTTAAAATCTAAATCCATATTAACTAATAAAAAAATAGAACCAACTACTGCAACATTATCTAGGAACAAATCCATATCATCTCAGAACAAATTAGAATCAACTACATCAGCATCATCTCAGGACAAGGAAACAGTTTCTGATGATGCAAATCAAAGTCATCTTCCATCTGGAGAGAAAAATCTGAAAACAGATCTGTCAGAGTTCATTCCAAGAAAAAAATCCAGCCGCCGGAAATCTTATACAACTTCACTAATTGAAGGATCCAAGTTTCTCAAGGAAAGTGGTGAAGTTAGAGAGCAGGACAACCTACCAAATATAGATAATGAATGCAATCAACTTGAAGTTTCTGAATACATTGATGACATATATCAGTACTATTGGGTTACTGAGGCACATAATCCAGTTTTAGCAAATTACATGTCAATTCAGAATGACATTTCATCTCATTTGCGGGGCGTTTTGATCAACTGGCTGATTGAAGTACACTACAAATTTGATTTGATGCCAGAAACACTGTATCTCACTGTTACATTGTTGGATCAATATCTTTCCCAAGTGACTATAAAAAAGACTGATATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAGTATGAGGATTTTTGGCATCCTAGGGTCAAAGATTTAATTAGCATATCAGCTGAGGCATATACTAGAGATCAAATGCTTGGAATGGAAAAGCTAATTCTTAGAAAATTAAAGTTCCGTCTTAATGCTCCTACACCTTATGTTTTTATGGTGAGGTTTCTAAAGGCTGCAGAATCAGATAAGAAGCTTGAGCACATGGCATTCTTTTTGGTTGACCTATGCTTAGTTGAATATGAAGCATTAGCATTCAAGCCTTCATTAATTTGTGCATCTGCTCTCTATGTTGCTCGTTGTACTCTGCAAATAACTCCACCATGGAATTGTGCGGATATGATACTGAAGTTCCACAAAGCTGCCGGGGTTGGAAAGTTGAAGGTTTCATATGAAAAATACTCTAGACAGGAACTAAGTAGGGTTGCAGCAGTGAAACCGTTGGAAAGACTTCCCCTGTGA 1566 0.3825 MKVSAGSSTKIVGVSLRKSFTGRVQKNTRKGDIQLDALNRDVQKKNTNGGQTVIATKDRFTRKPIATSTSRKSLPVPRVSRDDMSNTKENVKSSQTEKGLSGLPTKATTSRRDSSQLINARSNLWKNRVSDGFVPMVQPNVLLASSRNSTKPIVKTILEASTAQRTLKSKSILTNKKIEPTTATLSRNKSISSQNKLESTTSASSQDKETVSDDANQSHLPSGEKNLKTDLSEFIPRKKSSRRKSYTTSLIEGSKFLKESGEVREQDNLPNIDNECNQLEVSEYIDDIYQYYWVTEAHNPVLANYMSIQNDISSHLRGVLINWLIEVHYKFDLMPETLYLTVTLLDQYLSQVTIKKTDMQLVGLTALLLASKYEDFWHPRVKDLISISAEAYTRDQMLGMEKLILRKLKFRLNAPTPYVFMVRFLKAAESDKKLEHMAFFLVDLCLVEYEALAFKPSLICASALYVARCTLQITPPWNCADMILKFHKAAGVGKLKVSYEKYSRQELSRVAAVKPLERLPL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1267 521 CDD CYCLIN 316 405 IPR013763 -
Aed4g1267 521 SUPERFAMILY Cyclin-like 277 413 IPR036915 -
Aed4g1267 521 Pfam Cyclin, C-terminal domain 415 477 IPR004367 -
Aed4g1267 521 Pfam Cyclin, N-terminal domain 287 413 IPR006671 -
Aed4g1267 521 PANTHER CYCLINS 81 518 IPR039361 -
Aed4g1267 521 CDD CYCLIN 413 478 IPR013763 -
Aed4g1267 521 Gene3D - 408 519 - -
Aed4g1267 521 Gene3D - 302 407 - -
Aed4g1267 521 SUPERFAMILY Cyclin-like 415 518 IPR036915 -
Aed4g1267 521 SMART cyclin_7 419 511 IPR013763 -
Aed4g1267 521 SMART cyclin_7 322 406 IPR013763 -
Aed4g1267 521 MobiDBLite consensus disorder prediction 89 114 - -
Aed4g1267 521 MobiDBLite consensus disorder prediction 184 240 - -
Aed4g1267 521 SMART Cyclin_C_2 415 516 IPR004367 -
Aed4g1267 521 MobiDBLite consensus disorder prediction 184 225 - -
Aed4g1267 521 MobiDBLite consensus disorder prediction 61 114 - -
Aed4g1267 521 PIRSF Cyclin_A_B_D_E 76 520 IPR039361 -
Aed4g1267 521 PIRSF Cyclin_A_B_D_E 8 131 IPR039361 -
Aed4g1267 521 PANTHER CYCLIN-B3-1-RELATED 81 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1267 Aed-Chr4 13505649 13515041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1267 70 521 Core Cell Cycle Gene Families AT1G16330 51.064 4.54e-153 450