Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1265 ATGAGTGAGGGAAATAGGAATCATTATTCATCATGTCCAGTATGTAGGAATCAACGAAGACGTCATGATGATGATAATTGTGAGTTTGGGCAATACTTTGCGAGTAATAGGTCAGGAGACTTTGAGAGTGCTTGTAGGCTCTTTGGATTTTCAAACTTGCTTAGACTAATGCATTTTGTGGAACCATCTGAAAGGCAAGTTGCTGTAGATTCCATTTTATTGGAGGCTAACATTTGGGATCATGACCCTCATGGTGCCTATGGTTATACCTTCAATTTGGCTTCCCAAATTGACTCATTTGAAAGGGAATTAGAAACTGTTATCTCTACAAGATCTACTAACAAAGGAGAATTAAGTATTGTTGCGCCTAAGGAGAATGGGATTTTAGCTAGAGAGGGAGATTCGGAGGTTGGTGACATGGAGGAAGACATTATTCCTAACAAAAATACCAATTAA 456 0.386 MSEGNRNHYSSCPVCRNQRRRHDDDNCEFGQYFASNRSGDFESACRLFGFSNLLRLMHFVEPSERQVAVDSILLEANIWDHDPHGAYGYTFNLASQIDSFERELETVISTRSTNKGELSIVAPKENGILAREGDSEVGDMEEDIIPNKNTN 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1265 151 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Aed4g1265 151 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 108 - -
Aed4g1265 151 Pfam Lateral organ boundaries (LOB) domain 11 106 IPR004883 -
Aed4g1265 151 PANTHER LOB DOMAIN-CONTAINING PROTEIN 25-LIKE 10 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1265 Aed-Chr4 13475924 13477177 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1265 10 107 AS2 family AT3G50510 33.333 8.68e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed4g1265 LOB 4.2e-19 No_clan