Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1239 ATGGAAGACATAAACATGTGGCTATCCTTCTATGTGAATGAAAGAGTTAACCATGATTTCGCCATGCGAAAGTATTGCCCTGCAAGAATGGAGCAAGAGCAAGGAGGAGAGTGCCAAGACCAAGAGGAACTAGTTTTTGATACCGAATTATGTTCTTCTGATGCTACCAGCAGCGATCCTTATTTGGCTTCTTCGGAGGTTGATGACTTTGTTGATAGTTTCATCAACATGGATCAGTATGAGTATGAGTATGAGAATGGAGATCTAGGGTCCCAGGAGAAGCATCAAAGTTTTGACCACTTTGTGGTGAATGATGAGGATGAGGCTGATGCATACTCCATGGTGAACGGTGTCTTTGAATATGTTCCAACCATCATGGAGGATTCAGAATTGGAGATCTATGAAAATCTCACCACAGCCATGTTGGAGGAAGAGGTTCCAATGAATGGCTCTTTTGGTGCTATACCTGAGTTTGTTCCTTGTGCACAAGAGGCCAATCTTGGTGTGGACCAAGGGTTAGACTTGGTTCATCTGCTTTTGGCCTGTGCTGAAGCCGTGGGGTGCAGAGACAACCAGCAGACAGAGTTGCTTCTTCGCAGAATTTGGGCTTTGGCAAGCCCTTCAGGAGATGCGCTGCAGCGAGTCTCCTACTGTTTCGCCACAGGATTGAAGCGTAGATTATCACTTCTTCCTCATAATGTCATTGCAAATGGTACACTCACAAGTACTTCCATGGATGTGCCTTTTATCACTGGGGAGAATAAGGTGGAAGCTTTTCAACTTCTTTACCAAACCACACCTTACATTGCCTTTGGTTTCATGGCTGCAAATGAAGCCATATGCCAAGCGTCACAAGGAAAGAGCTCAATACACATTGTTGATTTAGGAATGGATCATACCCTTCAGTGGTCTTCCCTAATAAGGGCCCTTGCTTCAAGGCCTGAGGGCCCTCCAATGCTTCGGATCACTGGATTAATTGGCAACGCAGACAACTTAAAACTTCAAGCTAGCATGATTGTTCTTGTGGAGGAAGCAAGCTCATTGGGAATGCATCTTGAATTCCACACAATTTCTGAGCTTGCAACTCCATCTCTTCTTACTACGGAGAAGCTGAAGTTGAGAAAAGGTGAAGCTTTGTTTGTTAATTGTATCTTGCAGTTGCACAAATATGTCAAAGAAAGTAGAGGCTATCTGAAGGAAATTCTTCTATCAATGAAGAAGTTAGGTCCAACTGCACTTACAGTGGTAGAGCAAGACACAAATCATAATGGCCCTTTCTTCCTTGGGAGATTTTTGGAATCACTGCACTATTACTCAGCCATATTTGATTCTCTTGAGGCAACTATGCCAAGAAATAGCCAACAGAGGATGAAAATAGAGAGATTACACTTTGCAGAGGAAATTCAAAATATTGTAGCTCATGAGGGTCCAGATAGAATAGAAAGACATGAAAGGGTAGACCAATGGAGAAGGCAATTAGGCCGAGCAGGATTTCAGTCCTATAGTTCCTATGGTAATGTTTCTGATATTGAAAATAGTCAACTGCCACAAGGAGAAAAAGATATAACCAGGAACTTGCCAAGAAAAATGAAATTGCAGATAGCACATCAACTTTTGAGTCTTTACATCCAGTTTTGCAGATAG 1644 0.4258 MEDINMWLSFYVNERVNHDFAMRKYCPARMEQEQGGECQDQEELVFDTELCSSDATSSDPYLASSEVDDFVDSFINMDQYEYEYENGDLGSQEKHQSFDHFVVNDEDEADAYSMVNGVFEYVPTIMEDSELEIYENLTTAMLEEEVPMNGSFGAIPEFVPCAQEANLGVDQGLDLVHLLLACAEAVGCRDNQQTELLLRRIWALASPSGDALQRVSYCFATGLKRRLSLLPHNVIANGTLTSTSMDVPFITGENKVEAFQLLYQTTPYIAFGFMAANEAICQASQGKSSIHIVDLGMDHTLQWSSLIRALASRPEGPPMLRITGLIGNADNLKLQASMIVLVEEASSLGMHLEFHTISELATPSLLTTEKLKLRKGEALFVNCILQLHKYVKESRGYLKEILLSMKKLGPTALTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEATMPRNSQQRMKIERLHFAEEIQNIVAHEGPDRIERHERVDQWRRQLGRAGFQSYSSYGNVSDIENSQLPQGEKDITRNLPRKMKLQIAHQLLSLYIQFCR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1239 547 ProSiteProfiles GRAS family profile. 166 547 IPR005202 -
Aed4g1239 547 Pfam GRAS domain family 175 502 IPR005202 -
Aed4g1239 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 500 IPR005202 -
Aed4g1239 547 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 3 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1239 Aed-Chr4 12649036 12650975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1239 170 506 GRAS Transcription Factor Family AT1G66350 39.233 1.04e-65 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed4g1239 GRAS 1.5e-94 CL0063