Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1227 ATGACCTTTCTTCACGTTTTGTTAGTCTTTCCATATTTGAAGCAAGCTATCAAGCTTAAACAAGAAAAATGGCTTGCTTTCATGCACTTGGTGTTGTGGTGGAGTACTTGTAATCATGTTCAAGCAGCAATTAACAGTTTAAAGCCCGGCGATACACTAGATTACAGAACATCTCTAAATTCTGCCAACGAAAAATATTATCTAGCTTTCGGTGGGAGAATTGTGAAGAAGAACTACTTGGCTGTATTCAATGAAAAATTTGATATTGATATTTGGATCGGTAATAGAAACCAACCTGTCCCGGATCCGAATTTCGCAGTTCTATTACTAGATCACTCTGGAGTGCTGAAAATAGAATCTGAAGCTGATGAGGAAAATCCAATAATCCTTTATTCTCCACCTCAGGCTATAAACAACACTGTGGCCACCCTGTTGGACACAGGCAACTTTGTGCTTCAACAAGTTCACGCCAATGGGACAAAGACTCTGTTGTGGCAGAGTTTTGATTATCCAACTGACACTTTGATGCCCACCATGAAGTTAGGTGTTAATCACAAAACAAACCACCATTGGTCACTTGTTTCATTTTTTACTTATAAGGATGAGTTTTCCGGCGTATTTAGTCTTGAATGGGAATCCACGGAACAAGAACTGGTCATAAGGAGACGCAGACAAGTCAGTTGGCGGAGTGGGAAACTGAGGAACAACAACAGATTTGAGCACATTCCAGAGGATGTGCAAAGCATGATGAAGTACATCGTGGTGTCTAACAGGGATGAGAGTTCCTTCTCTTTCACAAGTACAACTGATGATGAAGCTGCTGCGTTGTTGATCTCAGCAGAGGGGGGAATAAGAAACCTTGAGGAGAGAACTCTTGTATCGTCTGATATGTGTGATGGATATAACTACACTGGAGGGTGCCAAAGATGGGAGCCAATACCTAAATGTAGGAATCGTAGTGACGCCTTCGAGAAATATTCCGGTCATTATGGAGGGGATGGTGCCAAATGGAGTGAACCAAATGCCACTTATGGCATGAGTGATTGCCAGGCCATTTGCTGGAGCAATTGTACTTGCATTGGATTCAAAAAACTCTATTATGATGGAACTGGATGCATTTTCTTTTCTGAGAAAGCTTTTACTATTGACCCGGAGGGTGTTGGTGAAGAGGTTTTTATGCTAGGGAACCAAACCCACCATGACGGCAACATGGGCAAGTCTACTACGAACTCACGACCTACTCCAGGTAAAAAAAAATGGATATGGATAATTGCGATAATAGCATCTGCTCTATTCTTAATCTGCCTATCCATTATGTGCATAACCTTGAAGAAACGAAAAGATGCACTTCAAGAGAAGAAAAAGAAAGAAATGGTATTGAAGATGTCAGCTTCAACAACATGTAATGAGTCATCTGCTATCAAAGATTTTGAAGCTGATTTAGAAAAGAGACACGGTTTAAAAGTATTCGATTATACATCAGTTATGACAGCTACAAATGGATTTTCATCTGAAAATAAGTTAGGTCAGGGAGGCTTTGGACCTGTTTATAAGGTACTTTGA 1563 0.4044 MTFLHVLLVFPYLKQAIKLKQEKWLAFMHLVLWWSTCNHVQAAINSLKPGDTLDYRTSLNSANEKYYLAFGGRIVKKNYLAVFNEKFDIDIWIGNRNQPVPDPNFAVLLLDHSGVLKIESEADEENPIILYSPPQAINNTVATLLDTGNFVLQQVHANGTKTLLWQSFDYPTDTLMPTMKLGVNHKTNHHWSLVSFFTYKDEFSGVFSLEWESTEQELVIRRRRQVSWRSGKLRNNNRFEHIPEDVQSMMKYIVVSNRDESSFSFTSTTDDEAAALLISAEGGIRNLEERTLVSSDMCDGYNYTGGCQRWEPIPKCRNRSDAFEKYSGHYGGDGAKWSEPNATYGMSDCQAICWSNCTCIGFKKLYYDGTGCIFFSEKAFTIDPEGVGEEVFMLGNQTHHDGNMGKSTTNSRPTPGKKKWIWIIAIIASALFLICLSIMCITLKKRKDALQEKKKKEMVLKMSASTTCNESSAIKDFEADLEKRHGLKVFDYTSVMTATNGFSSENKLGQGGFGPVYKVL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1227 520 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 23 518 - -
Aed4g1227 520 Gene3D - 44 204 - -
Aed4g1227 520 SMART blect_4 44 171 IPR001480 -
Aed4g1227 520 Gene3D Phosphorylase Kinase; domain 1 459 520 - -
Aed4g1227 520 ProSiteProfiles Bulb-type lectin domain profile. 44 165 IPR001480 -
Aed4g1227 520 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 518 - -
Aed4g1227 520 Pfam D-mannose binding lectin 91 195 IPR001480 -
Aed4g1227 520 SUPERFAMILY alpha-D-mannose-specific plant lectins 91 192 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1227 Aed-Chr4 12342786 12345279 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1227 423 518 Receptor kinase-like Gene Family AT5G65600 36.082 8.86e-08 53.1