Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1199 ATGGCATTCTATTTCTGGTTATGTGTTCTAGCATTTTATGTTGTGTGGTTAGTGGCATCTCCACTGTGCCATGTTCAAGGCAATAATGGTTGTGACTTTTCTCTTGGAAATTGGGTTGTTGATGACTCTTACCCTCTCTATGATGCATCAAGAGATTGCCCCTTCATAGGGCAAGGATTCAATTGCCTCATAAATGGTAGACCTGATCAGGAATACCTCAAGTATAGATGGAAACCCTCTGGTTGTGATCTTCAGAGGTTTGATGGGGTGAATTTCTTGGAGAGATACAAAGGGAAAAAGGTAATGTTTGTAGGGGACTCCATAAGCAACAACATGTGGCAATCACTTACATGTTTGGTTCACATTGCTGTCCCACAATCAAGTTATGCATTATCAAATCCAACAAAGAATCTCTTTGTGTTCTCATTTCCGGAATATGATACTTCAATAACGTGGTTGAAAAATGGGTTCCTAGTGGATGTGGTTCATGACAAAGAAAAAGGAAGGATTGTGAAACTTGACTCCATTACATCTGGGCTCATATTGGTTCAATTTCAAGTGGGCGATGAAATAATAAAAGACATGGATCCTATGGAAGCTTTCAAGATTGGGTTAACAACTTGGTCTCGATGGGTTGATGCTAACATTGATCCCTCAAAGACTACAGTCTTGTTTCAAGGAATTGCTGCATCTCATTCTGATGGAAAGGGGTGTCTCAACCAAACACAACCAGAGCAAGGACCACAGCCACCTTACCCTGGTGTAGAAATTGTGAAGAGCATTTTGAGTAGTATGTCATATCCAGTGTATTGGATTGACATTACTTTGATGACACAACTGAGGATAGATGGACACCCTTCTATATACACAGGAAAAGGAACTTCTTATGTGGATTGTAGTCACTGGTGTCTAGCTGGTGCTCCTGATACTTGGAATCAAATCTTGTATGCTGCTTTGCTTGGACTTTAA 969 0.4045 MAFYFWLCVLAFYVVWLVASPLCHVQGNNGCDFSLGNWVVDDSYPLYDASRDCPFIGQGFNCLINGRPDQEYLKYRWKPSGCDLQRFDGVNFLERYKGKKVMFVGDSISNNMWQSLTCLVHIAVPQSSYALSNPTKNLFVFSFPEYDTSITWLKNGFLVDVVHDKEKGRIVKLDSITSGLILVQFQVGDEIIKDMDPMEAFKIGLTTWSRWVDANIDPSKTTVLFQGIAASHSDGKGCLNQTQPEQGPQPPYPGVEIVKSILSSMSYPVYWIDITLMTQLRIDGHPSIYTGKGTSYVDCSHWCLAGAPDTWNQILYAALLGL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1199 322 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 178 321 IPR029962 GO:0016413
Aed4g1199 322 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 5 179 - -
Aed4g1199 322 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 84 178 IPR026057 GO:0016740
Aed4g1199 322 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 185 317 IPR026057 GO:0016740
Aed4g1199 322 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 178 321 - -
Aed4g1199 322 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 5 179 IPR029962 GO:0016413
Aed4g1199 322 Pfam PMR5 N terminal Domain 30 83 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1199 Aed-Chr4 11825097 11828568 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g1199 4 11825097 11828568 Aed4g1199 4 11825097 11828568 ECH
Aed1g0479 1 6517106 6520549 Aed4g1199 4 11825097 11828568 PCT