Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0014 ATGATGAATGTGATGGCTTCTCTGCTCCCTCCAACTGCTGCTACTTCCACACTCAAACACAACCAAATGGCTTCTTCTCCCTTGAAAGCAAACAATTTCTTCTTAGCATCAAACTCAAACCAGAAGCAGCGCAACAGGTCTGGAAAGTGCCATGCATTGTTTGATGACGTGGGAAAAGGGTTGTTGGAGAGCAGCAGCATTGTGAGTGAAGGCTTATCCGACATGCAGAGGTGGGGGTTCCTTGTGTTTGGTGGGTTGACTTGGATTTACTTGACGGCGAGACCAGGTGTGCTTCTTGGTGCCATTGATGCCTACCTCTTCGCACCTCTTCAACTCGCTCTCGACAGTTTTGCTGGAAGGAGGAACTTGAAGAGCAGTGATTTTGTGGTTGGAGATAAGCTCGGTGAAGGGTCCTTTGGTGTTGTCTATTCGGGTCTTTTGCTTCCAAGGAATGAGGGGAATGTCAATGTGGCGCAGAAGAAGAACAAGTCTTCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTTGGAATCCAAGGGGCTGAGGAGTTTGGTGATTATGAGGAGTGGTTCAATTACAGGCTATCTAGGGCAGCACCCGAAACATGTGCTGACTTCCTTGGAACTTTTGTAGCTGATCAAACCAATTCACAGTTTACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGGGATCGTACTCTTGCTGATTACATGAAAGATCGCAACTTCCCTTCAAACTTAGAATCTGTGATGTTTGGACGTGTCTTGCAAGGAGTGGACTCTTCCAAACGAAATGCATTGATCATCAAACAAATAATGCGCCAGATCATTACGTCTCTTAGGAAAATTCATGATACAGGCATTGTTCACAGGGATGTAAAGCCAGCCAACTTGGTGGTTACTAAACGAGGGCAGATTAAACTCATTGATTTTGGTGCAGCAACAGACCTTCGGATTGGAAAGAATTATGTTCCCAATCGTACCCTTTTGGATCCTGACTACTGCCCCCCAGAATTATATGTACTCCCTGAAGAAACACCAAGTCCACCACCAGAACCAATTGCTGCTTTCCTTTCACCAATCCTTTGGCAGTTAAACAGCCCTGATTTGTTTGATATGTATTCAGCTGGGATTGTACTCCTGCAAATGGCAATACCAAGCTTAAGGTCTCTTGCTGCTTTGAAGAATTTCAACTTGGAACTAAAAACCTGTGGATATGATTTGAAAAGATGGAGGGACTATACTCGCCTCAGGCCTGACTTCCAAATTCTAGATAGTGAATCAAGTAGAGGTTGGGACTTAGCAACAAAGCTTGTATCCGAGAGAGGTTCCCTAAGAAGAGGACGTTTATCTGCTGCTGCTGCCCTGCGACATCCTTATTTTCTTCTGGGTGGTGATCAAGCAGCTGCAGTCCTTTCAAAACTAAGCTTGAACAGAAAGTGA 1449 0.4458 MMNVMASLLPPTAATSTLKHNQMASSPLKANNFFLASNSNQKQRNRSGKCHALFDDVGKGLLESSSIVSEGLSDMQRWGFLVFGGLTWIYLTARPGVLLGAIDAYLFAPLQLALDSFAGRRNLKSSDFVVGDKLGEGSFGVVYSGLLLPRNEGNVNVAQKKNKSSKDKVILKKVKVGIQGAEEFGDYEEWFNYRLSRAAPETCADFLGTFVADQTNSQFTKGGKWLVWKFEGDRTLADYMKDRNFPSNLESVMFGRVLQGVDSSKRNALIIKQIMRQIITSLRKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPNRTLLDPDYCPPELYVLPEETPSPPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPSLRSLAALKNFNLELKTCGYDLKRWRDYTRLRPDFQILDSESSRGWDLATKLVSERGSLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLNRK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0014 482 Gene3D Transferase(Phosphotransferase) domain 1 261 465 - -
Aed4g0014 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Aed4g0014 482 ProSiteProfiles Protein kinase domain profile. 128 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0014 482 SUPERFAMILY Protein kinase-like (PK-like) 125 464 IPR011009 -
Aed4g0014 482 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 3 480 - -
Aed4g0014 482 Pfam Protein kinase domain 270 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0014 482 CDD STKc_SNT7_plant 132 463 - -
Aed4g0014 482 Gene3D Phosphorylase Kinase; domain 1 115 230 - -
Aed4g0014 482 SMART serkin_6 128 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed4g0014 482 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 3 480 IPR044803 GO:0004674|GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0014 Aed-Chr4 83380 86867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0014 111 319 MAP Kinase Kinase Kinase AT3G13530 25.472 4.41e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Aed4g0014 Pkinase 4.2e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0014 - - gmx:100788727 795.038