Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0991 ATGGCTGATGCTTCTGTGTCACCACCACCTCCACTGAAAGATGAGCTTGACATTGTGATCCCCACCATAAGGAACCTTGACTTTCTTGAGATGTGGAGGCCATTCTTGCAGCCTTATCATTTGATCATTGTTCAAGATGGTGACCCCACCAAAACCATTAAGGTTCCTGCTGGCTTTGATTATGAACTCTACAACCGCAATGACATCAACAAGCTTTTGGGGCCAAGGGCCTCTTGCATCTCCTTCAAGGACTCTGCTTGTCGTTGCTTCGGCTACATGGTGTCCAAGAAGAAGTACATCTTCACCATTGATGATGACTGCTTTGTTGCCAATGATCCATCTGGAAGACCGATTAATGCACTTGAGCAGCATATTAAGAACCTTTTGTGTCCATCCACTCCCTTATTCTTCAATACCCTTTATGACCCTTTCAGAGAAGGAGCAGATTATGTTCGTGGATACCCTTTTAGTCTTCGTGAAGGAACTTTATTCCCCATGTGTGGAATGAACTTGGCATTCGACCGTGATCTCATTGGACCAGCAATGTACTTTGGTCTCATGGGAGATGGTCAACCAATTGGACGCTACGATGACATGTGGGCTGGCTGGTGCTGCAAGGTAATCACTGACCATATGGGGATAGGAGTGAAGACAGGTCTGCCCTACATCTTCCACAGCAAGGCAAGTAACCCATTTGTTAACCTGAGGAAAGAGTACAAAGGCATATTCTGGCAGGAAGACATCATTCCATTCTTCCAGAATATTGTTCTTCCAAAAGAATGCACCACTGTTCAGAAGTGCTACATTGAGCTTGCAAAGCAAGTCAAGGAAAAGCTCTCAAAGATTGACCCTTACTTTGACAAGCTGGCTGATGCCATGGTCACTTGGATTGAAGCTTGGGATGAACTTAACCCTGCTGGAGCATCTAAGGCCAATGGCAAAGCATAA 948 0.4536 MADASVSPPPPLKDELDIVIPTIRNLDFLEMWRPFLQPYHLIIVQDGDPTKTIKVPAGFDYELYNRNDINKLLGPRASCISFKDSACRCFGYMVSKKKYIFTIDDDCFVANDPSGRPINALEQHIKNLLCPSTPLFFNTLYDPFREGADYVRGYPFSLREGTLFPMCGMNLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCCKVITDHMGIGVKTGLPYIFHSKASNPFVNLRKEYKGIFWQEDIIPFFQNIVLPKECTTVQKCYIELAKQVKEKLSKIDPYFDKLADAMVTWIEAWDELNPAGASKANGKA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0991 315 Pfam Reversibly glycosylated polypeptide 13 162 IPR037595 -
Aed3g0991 315 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 161 310 - -
Aed3g0991 315 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 2 161 - -
Aed3g0991 315 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 205 IPR029044 -
Aed3g0991 315 PANTHER UDP-ARABINOSE MUTASE 161 310 IPR037595 -
Aed3g0991 315 PANTHER UDP-ARABINOSE MUTASE 2 161 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0991 Aed-Chr3 7443653 7447405 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0991 3 7443653 7447405 Aed10g1149 10 10727494 10729495 ECH
Aed3g0991 3 7443653 7447405 Aed3g0991 3 7443653 7447405 ECH
Aed11g0488 11 4237597 4241858 Aed3g0991 3 7443653 7447405 ECH
Aed3g0991 3 7443653 7447405 Aed3g0991 3 7443653 7447405 PCT