Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0092 ATGAAAATGATTAAGGCAGTGACAATGGAAGAAGGTTCAGAGACAGGAAAGTGGGGATGGATGAAAACGAGAAGAGCAATGAGGGAGGAACTGAAGAAGGTGGGGACTATAGCAGCTCCAATGGTGATTGCAAGTGTGTTGCAATATCTTCTGCAAGTGGTGTCTTTGGTAATGGTTGGCCATCTTAACCAGCTCTCTCTTTCAAGTGTTGCTATTGCTACCTCTCTCACCAACGTTTCTGGCTTTAGTGTTTTGAGTTTGATTTCTCCAATGATTCTAACCTCTTCTCTAGCCTTGTGCTTCCACGTAGTAACATGTTGGACCCTTATATTTAAATTGGGTTTGGGACATGTTGGTGCTGCAATCTCCTTCAGTCTATGCGTTTGGTTGAATGTCATGTTGCTTTTGTCCTTTGTGAGGTATTCCTCTGCTTGTGACAAAACGCGCTTCCCTTTCTCCATCAATTCTTTGCTTGCTGTTGGAGAGTTCTTTCGCTTTGCTGTCCCAGCAGCAGTTATGGTTTGTCTTAAATGGTGGGCCTGTGAGATACTTGTTTTGTTGGCTGGAATTTTTCCAGACCCAAAGTTAGAGACATCAGTCCTATCTATATGCTTGACAATTTCTACATTACATTTCACCATACCCTATGGGTTTGGGGCTGCTGCTAGCACTAGAGTTTCGAATGAATTAGGAGCTGGGAATCCAGAAGCAGTTGGTGTGGCTGTTTCTACAACAATGTTCCTTTCAGTGACAGAGGGTCTCATTATAAGTGCAACACTATTCGGCTGCAGACATATCTTAGGTTATGCCTATAGCGATGACCCTATGGTTGTTGATTACGTGTCTGTTATGACTCCTCTGCTCTGTCTCTCCATTTTTACTGATAGTTTACAAGCAGTTCTTTCAGGGGTTGCTAGAGGCAGTGGGTGGCAAAATATTGGAGCCTATGTGAATCTTGGAGCGTTTTATCTGGTAGGAATTCCTGTTGGTGCCCTACTTGGCTTTGTTGCACATTTCAGAGCAAGGGGCCTTTGGATTGGAATTGTCACTGGCTCCATTCTCCAATCGATTCTCCTTTCACTTATTACTGCTCTTACAAACTGGAAAAAACAGGCAATGATGGCAAGGCTGAGAATATTTAATGCCAAACCACCCAACGAAAATGGATCAAATCACATCACAAGTGCTTAA 1191 0.4316 MKMIKAVTMEEGSETGKWGWMKTRRAMREELKKVGTIAAPMVIASVLQYLLQVVSLVMVGHLNQLSLSSVAIATSLTNVSGFSVLSLISPMILTSSLALCFHVVTCWTLIFKLGLGHVGAAISFSLCVWLNVMLLLSFVRYSSACDKTRFPFSINSLLAVGEFFRFAVPAAVMVCLKWWACEILVLLAGIFPDPKLETSVLSICLTISTLHFTIPYGFGAAASTRVSNELGAGNPEAVGVAVSTTMFLSVTEGLIISATLFGCRHILGYAYSDDPMVVDYVSVMTPLLCLSIFTDSLQAVLSGVARGSGWQNIGAYVNLGAFYLVGIPVGALLGFVAHFRARGLWIGIVTGSILQSILLSLITALTNWKKQAMMARLRIFNAKPPNENGSNHITSA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0092 396 TIGRFAM matE: MATE efflux family protein 90 345 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed3g0092 396 PANTHER PROTEIN DETOXIFICATION 86 375 - -
Aed3g0092 396 PANTHER PROTEIN DETOXIFICATION 20 86 - -
Aed3g0092 396 PANTHER MULTIDRUG RESISTANCE PROTEIN 86 375 - -
Aed3g0092 396 Pfam MatE 169 331 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed3g0092 396 PANTHER MULTIDRUG RESISTANCE PROTEIN 20 86 - -
Aed3g0092 396 CDD MATE_eukaryotic 30 372 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0092 Aed-Chr3 715612 718243 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0092 3 715612 718243 Aed7g0262 7 1847376 1851202 ECH
Aed3g0092 3 715612 718243 Aed3g0092 3 715612 718243 ECH
Aed8g2221 8 26497513 26499752 Aed3g0092 3 715612 718243 PCT