Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0085 ATGGCTTCTTGGTGGGATTTAAGACCCTTCTTTGGTTTTCAGTCTGTTAGAACCCGATTTCAGGATTTATCAGGCCGCAGGTTGGGGATCTCTGCTGTGACTGATGCTCAATTTTCGTCCATTAATTTTTCATTGATAGACACAAAGAATGAAGAGGAATTCAGGACAAGGGAAGTCCAACTTGGTTCACATACTGTGAGTTCTCATGGATATGCAGTTGCAAGAACACACAAACATGACTGGCTCATTCTCTTGCTCCTCGTGTTGATTGTTATTGGCCTTTACGTTATCCATCCTTTCCATCGCTTTGTTGGGAAGGATATGATGACTGATCTCAAATATCCTCTGAAGAGTAATACAGTTCCTGTTTGGGCTGTTCCTATATATGCAGGTTTATTGCCTCTAGTGATCTTTCTTGTTGTCTATATTCGAAGGAGCGATGTCTATGATCTTCATCATGCTGTGTTGGGTCTATTGTTCTCCATTTTAATAACATCAGTATTTACTGAGGCAATAAAAAATGCAGTAGGTCGACCTCGGCCGGACTTCTTTTGGCGATGTTTTCCAGATGGAAAGGATGTTTATGATAAATTGGGAGATGTCATTTGTCATGGTGACGAAAAGGTCATAAAGGAAGGATATAAGAGTTTCCCAAGCGGCCATACTTCATGGTCATTTGCTGGTCTGGGGTTTTTATCATTGTACTTATCTGGAAAAATAAAAGCATTTGATCGCAAAGGTCATATTGCAAAACTTTGCATTGTTTTTCTACCACTACTTTTTGCATCACTTGTTGGCATTTCTCGAGTCGATGACTACTGGCACCACTGGCAGGACGTGTTTGCTGGAGGTCTTTTAGGGCTTACAGTGGCTACATTTTGCTATTTGCAGCTTTTCCCTCCCCCTTATCATTCTGAAGGTTGGGGTCCTTATGCATATTTTAGGATGTTGGAAGAATCACGTGGTATGACCCAAGTTCCTAGTGTTCAAAACTCTGGTCAAGCGCAGTTAGCAGAGGCTCGGGTTGAGAGCCAGGAGGAGCAAGGTCTCCATGGGTGTATGGGGTTAACTTTATCACGGGATCATAATCATAATGCAACATTGGATGACGTTGAATCTGGGAGGAGATAA 1131 0.4209 MASWWDLRPFFGFQSVRTRFQDLSGRRLGISAVTDAQFSSINFSLIDTKNEEEFRTREVQLGSHTVSSHGYAVARTHKHDWLILLLLVLIVIGLYVIHPFHRFVGKDMMTDLKYPLKSNTVPVWAVPIYAGLLPLVIFLVVYIRRSDVYDLHHAVLGLLFSILITSVFTEAIKNAVGRPRPDFFWRCFPDGKDVYDKLGDVICHGDEKVIKEGYKSFPSGHTSWSFAGLGFLSLYLSGKIKAFDRKGHIAKLCIVFLPLLFASLVGISRVDDYWHHWQDVFAGGLLGLTVATFCYLQLFPPPYHSEGWGPYAYFRMLEESRGMTQVPSVQNSGQAQLAEARVESQEEQGLHGCMGLTLSRDHNHNATLDDVESGRR 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0085 376 CDD PAP2_containing_1_like 110 297 - -
Aed3g0085 376 SMART acid_phosph_2 155 295 IPR000326 -
Aed3g0085 376 PANTHER LIPID PHOSPHATE PHOSPHATASE 49 375 IPR043216 GO:0006644
Aed3g0085 376 PANTHER LIPID PHOSPHATE PHOSPHATASE 1 49 375 - -
Aed3g0085 376 Pfam PAP2 superfamily 155 298 IPR000326 -
Aed3g0085 376 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 74 307 - -
Aed3g0085 376 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 76 304 IPR036938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0085 Aed-Chr3 681860 686539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0085 57 375 Lipid Metabolism Gene Families AT3G02600 70.846 1.36e-167 469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0085 3 681860 686539 Aed3g0085 3 681860 686539 ECH
Aed11g0798 11 12050483 12052304 Aed3g0085 3 681860 686539 ECH
Aed1g1895 1 16230345 16234333 Aed3g0085 3 681860 686539 ECH