Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2677 ATGGAAGATATAGGTCCGAATTCATGCACAGGGACAGGGGGGCCAGTGGTAGCTGAGAAGAAAGCAAGGCCACAAGAGCAAGTGAATTGTCCAAGGTGCAGTTCAACCAACACAAAGTTCTGTTATTACAACAACTACAGCCTCACACAGCCCAGATACTTCTGCAAGACATGTAGAAGGTATTGGACTGAAGGTGGCTCTCTCAGAAACGTTCCCGTTGGAGGTGGCTCTAGGAAGAACAAGAGGGTGCTCTCTACCTCATCATCAAAGGTTCCTGACTTGAACCCACCACCACCAAACCCTAAAGTGCAGCAAGGACTCCATGATCTTAATCTTGCTTTTCCTGCAGCTATGGACCACAAGTATCATCATGGAATTGCCATGTCATCTCCATATGTTGAAATTGGTGCTCATGATCACAGTACTAGTCATAGTCCAACAGCAGTTGAGCTACTACGGTCTGGCATGGCTTCTAGGGGTTTCAATATTCCTTATGCTTCTAACTCCCTTTACACACCAGCTGGCTATCCCATGCAGCAGGAAATTAAACCAAACCTTAGCTTTTCAGTTGATGGGTTTGGAAATAGATCATATGGGGTTCAAGAAAATGGTGGTGGGAGGCTTTTGTTCCCCTTTGGTGAAATCAAGCACCTTTCTGCTGGTGTTGAAGTGGAACACAATAAAGAGCAAGCAAATAATCCAACTGGGTATTGGACTGGTATCATTGGCGAAGGCTCTTCATGGTAA 747 0.4552 MEDIGPNSCTGTGGPVVAEKKARPQEQVNCPRCSSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRVLSTSSSKVPDLNPPPPNPKVQQGLHDLNLAFPAAMDHKYHHGIAMSSPYVEIGAHDHSTSHSPTAVELLRSGMASRGFNIPYASNSLYTPAGYPMQQEIKPNLSFSVDGFGNRSYGVQENGGGRLLFPFGEIKHLSAGVEVEHNKEQANNPTGYWTGIIGEGSSW 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2677 248 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Aed2g2677 248 MobiDBLite consensus disorder prediction 69 100 - -
Aed2g2677 248 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Aed2g2677 248 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 16 242 - -
Aed2g2677 248 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 242 IPR045174 GO:0003700|GO:0006355
Aed2g2677 248 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2677 Aed-Chr2 28891593 28892339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2677 16 248 C2C2-Dof Transcription Factor Family AT3G61850 47.253 1.77e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed2g2677 zf-Dof 7.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2677 - - gmx:100775598 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2677 2 28891593 28892339 Aed2g0525 2 3757390 3758250 PCT