Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0525 ATGGAGGGGAATATGGATCCCAATTCATGTGCAAGGACAGGAGATATAGAGAAGAAAGCAAGGCCACAAGAGCAACTGAACTGTCCAAGGTGCAATTCAACCAACACAAAGTTCTGTTATTACAACAACTACAGCCTCACACAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACTGAAGGAGGGTCTCTGAGAAACGTTCCAGTTGGAGGTGGTTCAAGAAAGAACAAGAAGATAATAACTAATTCAGCATCACCAAAGATTCCAGACCTAAACCCCCCAATAAACCTCTCAGCTGCTATCTCATCACAAAACCCTAAAATGATGCATGGAGGCCAAGATCTCAACCTGGCTTTCCCATCTATGGAAAAGTACCATCATCATGGCATGTCATCACCTTATGTTGATCATCAAATGCAAAACAGTGATCCTTCTTGTTCTGCTCCTCCTCCTCCTCCTCCTCCTCCAGCTGCTTCTTCTCTTTCAGCTCTTGAGCTACTTAGGTCAAGCATGGCATCTAGGGGTTTGAACCCTTATGCTCCTAATTCTTCCTTGATTATGCCAAACAACTCAATTTATCCATCAGGGTTTCCCATGCAAGAAGTTAAACCAAGCCTTGGATTTTCTTCAGTTGATGGAATGGGAAATAATAGATCATATGATCATGATCATCAGGTTCAAGAGAGGGGTGGTGGCGGCAGAGTTTTGTTCCCTTTTGTTGGAGATCATGTCAAACAGCTTTCTGCTGCAGGTGCTGCTGATCAAGTGGAACACAATAAAGAACAACAACAACAACAACAAGGGAATAACTCAACTGGATATTGGACTGGAATGATTGGTGAAGGAACATGGTAA 861 0.4309 MEGNMDPNSCARTGDIEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIITNSASPKIPDLNPPINLSAAISSQNPKMMHGGQDLNLAFPSMEKYHHHGMSSPYVDHQMQNSDPSCSAPPPPPPPPAASSLSALELLRSSMASRGLNPYAPNSSLIMPNNSIYPSGFPMQEVKPSLGFSSVDGMGNNRSYDHDHQVQERGGGGRVLFPFVGDHVKQLSAAGAADQVEHNKEQQQQQQGNNSTGYWTGMIGEGTW 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0525 286 MobiDBLite consensus disorder prediction 1 24 - -
Aed2g0525 286 MobiDBLite consensus disorder prediction 147 161 - -
Aed2g0525 286 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Aed2g0525 286 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
Aed2g0525 286 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Aed2g0525 286 MobiDBLite consensus disorder prediction 131 162 - -
Aed2g0525 286 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 281 IPR045174 GO:0003700|GO:0006355
Aed2g0525 286 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 8 281 - -
Aed2g0525 286 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0525 Aed-Chr2 3757390 3758250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0525 18 286 C2C2-Dof Transcription Factor Family AT3G61850 47.931 1.88e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aed2g0525 zf-Dof 2.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0525 - - gmx:778110 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0525 2 3757390 3758250 Aed2g0525 2 3757390 3758250 ECH
Aed2g2677 2 28891593 28892339 Aed2g0525 2 3757390 3758250 PCT